Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133163540-133353553

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi742 1 133163654 to 133164825 1171 CpG island CpG island 742
Tssr8784 1 133163851 to 133163921 70 + TSS region transcription start site region 8784
Tssr211 1 133163934 to 133163945 11 + TSS region transcription start site region 211
Tssr8785 1 133163974 to 133164039 65 + TSS region transcription start site region 8785
Plekha6 1 133164210 to 133303435 139225 + protein coding gene pleckstrin homology domain containing, family A member 6
Tssr8786 1 133172948 to 133172951 3 + TSS region transcription start site region 8786
Tssr8787 1 133181340 to 133181404 64 + TSS region transcription start site region 8787
Cpgi743 1 133181422 to 133181699 277 CpG island CpG island 743
Cpgi744 1 133182333 to 133182899 566 CpG island CpG island 744
Tssr8788 1 133204677 to 133204709 32 + TSS region transcription start site region 8788
Tssr8789 1 133223040 to 133223048 8 + TSS region transcription start site region 8789
Tssr8790 1 133232025 to 133232050 25 + TSS region transcription start site region 8790
Tssr8791 1 133241183 to 133241213 30 + TSS region transcription start site region 8791
Tssr8792 1 133241217 to 133241260 43 + TSS region transcription start site region 8792
Tssr8793 1 133245888 to 133245905 17 + TSS region transcription start site region 8793
Tssr8794 1 133246092 to 133246099 7 + TSS region transcription start site region 8794
Gm19461 1 133250398 to 133269808 19410 - antisense lncRNA gene predicted gene, 19461
Tssr8795 1 133255244 to 133255248 4 + TSS region transcription start site region 8795
Tssr8796 1 133255679 to 133255728 49 + TSS region transcription start site region 8796
Tssr8797 1 133256082 to 133256099 17 + TSS region transcription start site region 8797
Tssr8798 1 133256113 to 133256155 42 + TSS region transcription start site region 8798
Tssr13683 1 133256322 to 133256345 23 - TSS region transcription start site region 13683
Tssr13684 1 133258506 to 133258514 8 - TSS region transcription start site region 13684
Tssr13685 1 133258540 to 133258553 13 - TSS region transcription start site region 13685
Tssr8799 1 133309778 to 133309829 51 + TSS region transcription start site region 8799
Golt1a 1 133309823 to 133323026 13203 + protein coding gene golgi transport 1A
Gm28040 1 133309827 to 133329722 19895 + protein coding gene predicted gene, 28040
D1Mit287 1 133318350 to 133318472 122 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 287
D1Mit287S 1 133318466 to 133318585 119 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-287S
Kiss1 1 133321887 to 133329722 7835 + protein coding gene KiSS-1 metastasis-suppressor
Tssr8800 1 133323963 to 133323967 4 + TSS region transcription start site region 8800
Cpgi745 1 133329045 to 133329763 718 CpG island CpG island 745
Tssr13686 1 133332268 to 133332270 2 - TSS region transcription start site region 13686
D1Mit472 1 133343504 to 133343643 139 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-472
D1Mit1011 1 133350256 to 133350435 179 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1011
Tssr212 1 133350285 to 133350300 15 + TSS region transcription start site region 212
D1Mit1010 1 133350302 to 133350435 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1010
D1Mit1012 1 133350512 to 133350690 178 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1012
Tssr8801 1 133350667 to 133350683 16 + TSS region transcription start site region 8801
Ren1 1 133350674 to 133360320 9646 + protein coding gene renin 1 structural
Tssr8802 1 133352510 to 133352529 19 + TSS region transcription start site region 8802