Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133023851-133303921

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mdm4 1 132986105 to 133030587 44482 - protein coding gene transformed mouse 3T3 cell double minute 4
Cpgi738 1 133024956 to 133025509 553 CpG island CpG island 738
Tssr13676 1 133025330 to 133025391 61 - TSS region transcription start site region 13676
Gm29257 1 133025843 to 133026478 635 + pseudogene predicted gene 29257
Gm41953 1 133026733 to 133035870 9137 + lncRNA gene predicted gene, 41953
Tssr13677 1 133030580 to 133030586 6 - TSS region transcription start site region 13677
n-TKctt26 1 133033962 to 133034034 72 + tRNA gene nuclear encoded tRNA lysine 26 (anticodon TTT)
n-TKctt25 1 133034327 to 133034399 72 - tRNA gene nuclear encoded tRNA lysine 25 (anticodon TTT)
Cpgi739 1 133045626 to 133046921 1295 CpG island CpG island 739
Pik3c2b 1 133045672 to 133108691 63019 + protein coding gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
Tssr8760 1 133045984 to 133046082 98 + TSS region transcription start site region 8760
Tssr208 1 133046085 to 133046098 13 + TSS region transcription start site region 208
Tssr8761 1 133046143 to 133046162 19 + TSS region transcription start site region 8761
Tssr8762 1 133046164 to 133046187 23 + TSS region transcription start site region 8762
Tssr8763 1 133046191 to 133046206 15 + TSS region transcription start site region 8763
Gm28609 1 133050128 to 133068405 18277 - antisense lncRNA gene predicted gene 28609
Tssr8764 1 133053300 to 133053327 27 + TSS region transcription start site region 8764
Tssr13678 1 133068394 to 133068398 4 - TSS region transcription start site region 13678
Tssr8765 1 133068481 to 133068494 13 + TSS region transcription start site region 8765
Tssr8766 1 133068499 to 133068513 14 + TSS region transcription start site region 8766
Tssr13679 1 133071753 to 133071773 20 - TSS region transcription start site region 13679
Tssr8767 1 133084152 to 133084165 13 + TSS region transcription start site region 8767
Tssr8768 1 133092285 to 133092298 13 + TSS region transcription start site region 8768
Tssr209 1 133098644 to 133098655 11 + TSS region transcription start site region 209
Tssr8769 1 133103538 to 133103564 26 + TSS region transcription start site region 8769
Tssr8770 1 133108129 to 133108137 8 + TSS region transcription start site region 8770
Tssr8771 1 133108395 to 133108400 5 + TSS region transcription start site region 8771
Tssr13680 1 133118280 to 133118320 40 - TSS region transcription start site region 13680
Gm26616 1 133128676 to 133131782 3106 - protein coding gene predicted gene, 26616
Tssr8772 1 133129412 to 133129448 36 + TSS region transcription start site region 8772
Tssr8773 1 133130084 to 133130106 22 + TSS region transcription start site region 8773
Tssr8774 1 133130881 to 133130885 4 + TSS region transcription start site region 8774
Cpgi740 1 133130986 to 133132132 1146 CpG island CpG island 740
Ppp1r15b 1 133131166 to 133139800 8634 + protein coding gene protein phosphatase 1, regulatory subunit 15B
Tssr8775 1 133131239 to 133131254 15 + TSS region transcription start site region 8775
Tssr8776 1 133131267 to 133131283 16 + TSS region transcription start site region 8776
Tssr8777 1 133131288 to 133131364 76 + TSS region transcription start site region 8777
Tssr8778 1 133131369 to 133131382 13 + TSS region transcription start site region 8778
Tssr8779 1 133131408 to 133131437 29 + TSS region transcription start site region 8779
Tssr8780 1 133131451 to 133131473 22 + TSS region transcription start site region 8780
Tssr8781 1 133131809 to 133131824 15 + TSS region transcription start site region 8781
Tssr8782 1 133132222 to 133132235 13 + TSS region transcription start site region 8782
Cpgi741 1 133132379 to 133132607 228 CpG island CpG island 741
Tssr8783 1 133132648 to 133132666 18 + TSS region transcription start site region 8783
Tssr210 1 133133544 to 133133557 13 - TSS region transcription start site region 210
Tssr13681 1 133133578 to 133133585 7 - TSS region transcription start site region 13681
Tssr13682 1 133133598 to 133133606 8 - TSS region transcription start site region 13682
Cpgi742 1 133163654 to 133164825 1171 CpG island CpG island 742
Tssr8784 1 133163851 to 133163921 70 + TSS region transcription start site region 8784
Tssr211 1 133163934 to 133163945 11 + TSS region transcription start site region 211
Tssr8785 1 133163974 to 133164039 65 + TSS region transcription start site region 8785
Plekha6 1 133164210 to 133303435 139225 + protein coding gene pleckstrin homology domain containing, family A member 6
Tssr8786 1 133172948 to 133172951 3 + TSS region transcription start site region 8786
Tssr8787 1 133181340 to 133181404 64 + TSS region transcription start site region 8787
Cpgi743 1 133181422 to 133181699 277 CpG island CpG island 743
Cpgi744 1 133182333 to 133182899 566 CpG island CpG island 744
Tssr8788 1 133204677 to 133204709 32 + TSS region transcription start site region 8788
Tssr8789 1 133223040 to 133223048 8 + TSS region transcription start site region 8789
Tssr8790 1 133232025 to 133232050 25 + TSS region transcription start site region 8790
Tssr8791 1 133241183 to 133241213 30 + TSS region transcription start site region 8791
Tssr8792 1 133241217 to 133241260 43 + TSS region transcription start site region 8792
Tssr8793 1 133245888 to 133245905 17 + TSS region transcription start site region 8793
Tssr8794 1 133246092 to 133246099 7 + TSS region transcription start site region 8794
Gm19461 1 133250398 to 133269808 19410 - antisense lncRNA gene predicted gene, 19461
Tssr8795 1 133255244 to 133255248 4 + TSS region transcription start site region 8795
Tssr8796 1 133255679 to 133255728 49 + TSS region transcription start site region 8796
Tssr8797 1 133256082 to 133256099 17 + TSS region transcription start site region 8797
Tssr8798 1 133256113 to 133256155 42 + TSS region transcription start site region 8798
Tssr13683 1 133256322 to 133256345 23 - TSS region transcription start site region 13683
Tssr13684 1 133258506 to 133258514 8 - TSS region transcription start site region 13684
Tssr13685 1 133258540 to 133258553 13 - TSS region transcription start site region 13685