Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132955687-133065727

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr8757 1 132958050 to 132958055 5 + TSS region transcription start site region 8757
Gm38687 1 132961650 to 132971688 10038 - lncRNA gene predicted gene, 38687
Mdm4 1 132986105 to 133030587 44482 - protein coding gene transformed mouse 3T3 cell double minute 4
Tssr13668 1 133009639 to 133009643 4 - TSS region transcription start site region 13668
Tssr13669 1 133010687 to 133010727 40 - TSS region transcription start site region 13669
Tssr13670 1 133011868 to 133011871 3 - TSS region transcription start site region 13670
Tssr13671 1 133019388 to 133019407 19 - TSS region transcription start site region 13671
Tssr13672 1 133019410 to 133019419 9 - TSS region transcription start site region 13672
Tssr13673 1 133019425 to 133019448 23 - TSS region transcription start site region 13673
Tssr13674 1 133019480 to 133019496 16 - TSS region transcription start site region 13674
Tssr8758 1 133019655 to 133019668 13 + TSS region transcription start site region 8758
Tssr13675 1 133020250 to 133020273 23 - TSS region transcription start site region 13675
Tssr8759 1 133020349 to 133020381 32 + TSS region transcription start site region 8759
Cpgi738 1 133024956 to 133025509 553 CpG island CpG island 738
Tssr13676 1 133025330 to 133025391 61 - TSS region transcription start site region 13676
Gm29257 1 133025843 to 133026478 635 + pseudogene predicted gene 29257
Gm41953 1 133026733 to 133035870 9137 + lncRNA gene predicted gene, 41953
Tssr13677 1 133030580 to 133030586 6 - TSS region transcription start site region 13677
n-TKctt26 1 133033962 to 133034034 72 + tRNA gene nuclear encoded tRNA lysine 26 (anticodon TTT)
n-TKctt25 1 133034327 to 133034399 72 - tRNA gene nuclear encoded tRNA lysine 25 (anticodon TTT)
Cpgi739 1 133045626 to 133046921 1295 CpG island CpG island 739
Pik3c2b 1 133045672 to 133108691 63019 + protein coding gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
Tssr8760 1 133045984 to 133046082 98 + TSS region transcription start site region 8760
Tssr208 1 133046085 to 133046098 13 + TSS region transcription start site region 208
Tssr8761 1 133046143 to 133046162 19 + TSS region transcription start site region 8761
Tssr8762 1 133046164 to 133046187 23 + TSS region transcription start site region 8762
Tssr8763 1 133046191 to 133046206 15 + TSS region transcription start site region 8763
Gm28609 1 133050128 to 133068405 18277 - antisense lncRNA gene predicted gene 28609
Tssr8764 1 133053300 to 133053327 27 + TSS region transcription start site region 8764