Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132377365-132605659

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmcc2 1 132356315 to 132391281 34966 - protein coding gene transmembrane and coiled-coil domains 2
Cpgi728 1 132380659 to 132381038 379 CpG island CpG island 728
Gm15849 1 132381129 to 132382509 1380 + antisense lncRNA gene predicted gene 15849
Tssr13643 1 132384776 to 132384780 4 - TSS region transcription start site region 13643
Tssr13644 1 132390301 to 132390373 72 - TSS region transcription start site region 13644
Tssr13645 1 132390524 to 132390529 5 - TSS region transcription start site region 13645
Cpgi729 1 132390802 to 132392104 1302 CpG island CpG island 729
Tssr13646 1 132391658 to 132391682 24 - TSS region transcription start site region 13646
Tssr13647 1 132391697 to 132391762 65 - TSS region transcription start site region 13647
Tssr13648 1 132391767 to 132391805 38 - TSS region transcription start site region 13648
Tssr13649 1 132391806 to 132391822 16 - TSS region transcription start site region 13649
Cpgi730 1 132417221 to 132418218 997 CpG island CpG island 730
Tssr8744 1 132417377 to 132417402 25 + TSS region transcription start site region 8744
Tssr8745 1 132417409 to 132417464 55 + TSS region transcription start site region 8745
Tssr8746 1 132417555 to 132417609 54 + TSS region transcription start site region 8746
Dstyk 1 132417555 to 132466958 49403 + protein coding gene dual serine/threonine and tyrosine protein kinase
Tssr13650 1 132417970 to 132417980 10 - TSS region transcription start site region 13650
Tssr13651 1 132465910 to 132465914 4 - TSS region transcription start site region 13651
6030442K20Rik 1 132466433 to 132477064 10631 - unclassified gene RIKEN cDNA 6030442K20 gene
Tssr8747 1 132470264 to 132470275 11 + TSS region transcription start site region 8747
Cpgi731 1 132476966 to 132477702 736 CpG island CpG island 731
Tssr8748 1 132477361 to 132477412 51 + TSS region transcription start site region 8748
Rbbp5 1 132477365 to 132505659 28294 + protein coding gene retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
Tmem81 1 132506230 to 132508639 2409 + protein coding gene transmembrane protein 81
Tssr8749 1 132506247 to 132506259 12 + TSS region transcription start site region 8749
Cntn2 1 132509425 to 132543251 33826 - protein coding gene contactin 2
Cpgi732 1 132518719 to 132518902 183 CpG island CpG island 732
Tssr13652 1 132523681 to 132523706 25 - TSS region transcription start site region 13652
Tssr13653 1 132529021 to 132529025 4 - TSS region transcription start site region 13653
Cpgi733 1 132542696 to 132543112 416 CpG island CpG island 733
Tssr13654 1 132542857 to 132542878 21 - TSS region transcription start site region 13654
Tssr13655 1 132542882 to 132542906 24 - TSS region transcription start site region 13655
Tssr13656 1 132542934 to 132542954 20 - TSS region transcription start site region 13656
Nfasc 1 132564690 to 132741797 177107 - protein coding gene neurofascin
Tssr13657 1 132567003 to 132567016 13 - TSS region transcription start site region 13657