Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132111099-132611147

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107 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk18 1 132113547 to 132139957 26410 - protein coding gene cyclin-dependent kinase 18
Tssr8716 1 132114893 to 132114927 34 + TSS region transcription start site region 8716
Tssr8717 1 132116596 to 132116612 16 + TSS region transcription start site region 8717
Tssr13622 1 132116626 to 132116658 32 - TSS region transcription start site region 13622
Cpgi721 1 132116653 to 132116871 218 CpG island CpG island 721
Tssr13623 1 132116908 to 132116915 7 - TSS region transcription start site region 13623
Tssr13624 1 132116939 to 132116951 12 - TSS region transcription start site region 13624
Tssr13625 1 132116966 to 132116984 18 - TSS region transcription start site region 13625
Tssr13626 1 132131843 to 132131878 35 - TSS region transcription start site region 13626
Cpgi722 1 132138751 to 132139830 1079 CpG island CpG island 722
Gm29629 1 132139504 to 132142800 3296 + antisense lncRNA gene predicted gene 29629
Tssr13627 1 132139638 to 132139645 7 - TSS region transcription start site region 13627
Tssr13628 1 132139648 to 132139657 9 - TSS region transcription start site region 13628
Tssr13629 1 132139666 to 132139692 26 - TSS region transcription start site region 13629
Tssr8718 1 132143374 to 132143386 12 + TSS region transcription start site region 8718
Tssr8719 1 132143394 to 132143405 11 + TSS region transcription start site region 8719
Gm30153 1 132144755 to 132145520 765 - lncRNA gene predicted gene, 30153
Gm30242 1 132149403 to 132154142 4739 + lncRNA gene predicted gene, 30242
Cpgi723 1 132189910 to 132191803 1893 CpG island CpG island 723
Gm29695 1 132190089 to 132209547 19458 + lncRNA gene predicted gene, 29695
Tssr8720 1 132190413 to 132190438 25 + TSS region transcription start site region 8720
Lemd1 1 132190623 to 132257382 66759 + protein coding gene LEM domain containing 1
Tssr13630 1 132192018 to 132192031 13 - TSS region transcription start site region 13630
Mir135b 1 132198088 to 132198184 96 + miRNA gene microRNA 135b
Tssr13631 1 132200310 to 132200315 5 - TSS region transcription start site region 13631
1700037F24Rik 1 132201069 to 132203803 2734 - lincRNA gene RIKEN cDNA 1700037F24 gene
Cpgi724 1 132212410 to 132212582 172 CpG island CpG island 724
Tssr13632 1 132226150 to 132226190 40 - TSS region transcription start site region 13632
Tssr8721 1 132226313 to 132226348 35 + TSS region transcription start site region 8721
Gm10188 1 132229048 to 132229767 719 - protein coding gene predicted gene 10188
Tssr8722 1 132265989 to 132265993 4 + TSS region transcription start site region 8722
Gm29630 1 132274716 to 132280411 5695 - lincRNA gene predicted gene 29630
Gm38446 1 132278515 to 132291366 12851 - lncRNA gene predicted gene, 38446
Gm7241 1 132284453 to 132284809 356 + pseudogene predicted pseudogene 7241
Cpgi725 1 132298342 to 132299699 1357 CpG island CpG island 725
Tssr8723 1 132298498 to 132298505 7 + TSS region transcription start site region 8723
Tssr8724 1 132298550 to 132298561 11 + TSS region transcription start site region 8724
Tssr8725 1 132298570 to 132298600 30 + TSS region transcription start site region 8725
Tssr8726 1 132298606 to 132298631 25 + TSS region transcription start site region 8726
Klhdc8a 1 132298626 to 132307357 8731 + protein coding gene kelch domain containing 8A
Tssr8727 1 132298632 to 132298649 17 + TSS region transcription start site region 8727
Tssr8728 1 132298652 to 132298659 7 + TSS region transcription start site region 8728
Tssr8729 1 132298663 to 132298674 11 + TSS region transcription start site region 8729
Tssr8730 1 132299032 to 132299070 38 + TSS region transcription start site region 8730
Tssr8731 1 132299302 to 132299312 10 + TSS region transcription start site region 8731
Tssr8732 1 132299336 to 132299349 13 + TSS region transcription start site region 8732
Tssr8733 1 132302893 to 132302899 6 + TSS region transcription start site region 8733
Cpgi726 1 132315860 to 132316663 803 CpG island CpG island 726
Tssr8734 1 132316086 to 132316093 7 + TSS region transcription start site region 8734
Tssr8735 1 132316112 to 132316144 32 + TSS region transcription start site region 8735
Nuak2 1 132316126 to 132333488 17362 + protein coding gene NUAK family, SNF1-like kinase, 2
Tssr8736 1 132316200 to 132316211 11 + TSS region transcription start site region 8736
Gm30744 1 132321429 to 132323315 1886 - lncRNA gene predicted gene, 30744
Tssr8737 1 132329963 to 132329986 23 + TSS region transcription start site region 8737
Tssr8738 1 132342015 to 132342042 27 + TSS region transcription start site region 8738
F730311O21Rik 1 132342023 to 132349626 7603 + lincRNA gene RIKEN cDNA F730311O21 gene
Tssr8739 1 132342053 to 132342072 19 + TSS region transcription start site region 8739
Tssr8740 1 132342297 to 132342304 7 + TSS region transcription start site region 8740
Tssr8741 1 132342337 to 132342344 7 + TSS region transcription start site region 8741
Tssr8742 1 132342347 to 132342362 15 + TSS region transcription start site region 8742
Tssr8743 1 132342363 to 132342372 9 + TSS region transcription start site region 8743
Tmcc2 1 132356315 to 132391281 34966 - protein coding gene transmembrane and coiled-coil domains 2
Tssr13633 1 132357475 to 132357502 27 - TSS region transcription start site region 13633
Tssr13634 1 132357541 to 132357555 14 - TSS region transcription start site region 13634
Tssr13635 1 132357624 to 132357660 36 - TSS region transcription start site region 13635
Tssr13636 1 132358243 to 132358256 13 - TSS region transcription start site region 13636
Tssr13637 1 132358900 to 132358903 3 - TSS region transcription start site region 13637
Tssr13638 1 132360315 to 132360341 26 - TSS region transcription start site region 13638
Cpgi727 1 132360496 to 132361045 549 CpG island CpG island 727
Tssr13639 1 132360671 to 132360683 12 - TSS region transcription start site region 13639
Tssr13640 1 132361099 to 132361147 48 - TSS region transcription start site region 13640
Tssr13641 1 132367069 to 132367084 15 - TSS region transcription start site region 13641
Tssr13642 1 132367879 to 132367894 15 - TSS region transcription start site region 13642
Cpgi728 1 132380659 to 132381038 379 CpG island CpG island 728
Gm15849 1 132381129 to 132382509 1380 + antisense lncRNA gene predicted gene 15849
Tssr13643 1 132384776 to 132384780 4 - TSS region transcription start site region 13643
Tssr13644 1 132390301 to 132390373 72 - TSS region transcription start site region 13644
Tssr13645 1 132390524 to 132390529 5 - TSS region transcription start site region 13645
Cpgi729 1 132390802 to 132392104 1302 CpG island CpG island 729
Tssr13646 1 132391658 to 132391682 24 - TSS region transcription start site region 13646
Tssr13647 1 132391697 to 132391762 65 - TSS region transcription start site region 13647
Tssr13648 1 132391767 to 132391805 38 - TSS region transcription start site region 13648
Tssr13649 1 132391806 to 132391822 16 - TSS region transcription start site region 13649
Cpgi730 1 132417221 to 132418218 997 CpG island CpG island 730
Tssr8744 1 132417377 to 132417402 25 + TSS region transcription start site region 8744
Tssr8745 1 132417409 to 132417464 55 + TSS region transcription start site region 8745
Dstyk 1 132417555 to 132466958 49403 + protein coding gene dual serine/threonine and tyrosine protein kinase
Tssr8746 1 132417555 to 132417609 54 + TSS region transcription start site region 8746
Tssr13650 1 132417970 to 132417980 10 - TSS region transcription start site region 13650
Tssr13651 1 132465910 to 132465914 4 - TSS region transcription start site region 13651
6030442K20Rik 1 132466433 to 132477064 10631 - unclassified gene RIKEN cDNA 6030442K20 gene
Tssr8747 1 132470264 to 132470275 11 + TSS region transcription start site region 8747
Cpgi731 1 132476966 to 132477702 736 CpG island CpG island 731
Tssr8748 1 132477361 to 132477412 51 + TSS region transcription start site region 8748
Rbbp5 1 132477365 to 132505659 28294 + protein coding gene retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit
Tmem81 1 132506230 to 132508639 2409 + protein coding gene transmembrane protein 81
Tssr8749 1 132506247 to 132506259 12 + TSS region transcription start site region 8749
Cntn2 1 132509425 to 132543251 33826 - protein coding gene contactin 2
Cpgi732 1 132518719 to 132518902 183 CpG island CpG island 732
Tssr13652 1 132523681 to 132523706 25 - TSS region transcription start site region 13652
Tssr13653 1 132529021 to 132529025 4 - TSS region transcription start site region 13653
Cpgi733 1 132542696 to 132543112 416 CpG island CpG island 733
Tssr13654 1 132542857 to 132542878 21 - TSS region transcription start site region 13654
Tssr13655 1 132542882 to 132542906 24 - TSS region transcription start site region 13655
Tssr13656 1 132542934 to 132542954 20 - TSS region transcription start site region 13656
Nfasc 1 132564690 to 132741797 177107 - protein coding gene neurofascin
Tssr13657 1 132567003 to 132567016 13 - TSS region transcription start site region 13657