Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:132065089-132334547

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mfsd4a 1 132022806 to 132068062 45256 - protein coding gene major facilitator superfamily domain containing 4A
Gm26892 1 132036805 to 132067945 31140 + lincRNA gene predicted gene, 26892
Tssr8715 1 132065762 to 132065764 2 + TSS region transcription start site region 8715
Cpgi720 1 132067326 to 132068342 1016 CpG island CpG island 720
Tssr13618 1 132067903 to 132067913 10 - TSS region transcription start site region 13618
Tssr13619 1 132067924 to 132067948 24 - TSS region transcription start site region 13619
Tssr13620 1 132067956 to 132067974 18 - TSS region transcription start site region 13620
Tssr13621 1 132068013 to 132068025 12 - TSS region transcription start site region 13621
4833413N01Rik 1 132073785 to 132080176 6391 + lncRNA gene RIKEN cDNA 4833413N01 gene
Gm26034 1 132100639 to 132100754 115 + snRNA gene predicted gene, 26034
Gm37120 1 132102597 to 132106362 3765 + lncRNA gene predicted gene, 37120
Cdk18 1 132113547 to 132139957 26410 - protein coding gene cyclin-dependent kinase 18
Tssr8716 1 132114893 to 132114927 34 + TSS region transcription start site region 8716
Tssr8717 1 132116596 to 132116612 16 + TSS region transcription start site region 8717
Tssr13622 1 132116626 to 132116658 32 - TSS region transcription start site region 13622
Cpgi721 1 132116653 to 132116871 218 CpG island CpG island 721
Tssr13623 1 132116908 to 132116915 7 - TSS region transcription start site region 13623
Tssr13624 1 132116939 to 132116951 12 - TSS region transcription start site region 13624
Tssr13625 1 132116966 to 132116984 18 - TSS region transcription start site region 13625
Tssr13626 1 132131843 to 132131878 35 - TSS region transcription start site region 13626
Cpgi722 1 132138751 to 132139830 1079 CpG island CpG island 722
Gm29629 1 132139504 to 132142800 3296 + antisense lncRNA gene predicted gene 29629
Tssr13627 1 132139638 to 132139645 7 - TSS region transcription start site region 13627
Tssr13628 1 132139648 to 132139657 9 - TSS region transcription start site region 13628
Tssr13629 1 132139666 to 132139692 26 - TSS region transcription start site region 13629
Tssr8718 1 132143374 to 132143386 12 + TSS region transcription start site region 8718
Tssr8719 1 132143394 to 132143405 11 + TSS region transcription start site region 8719
Gm30153 1 132144755 to 132145520 765 - lncRNA gene predicted gene, 30153
Gm30242 1 132149403 to 132154142 4739 + lncRNA gene predicted gene, 30242
Cpgi723 1 132189910 to 132191803 1893 CpG island CpG island 723
Gm29695 1 132190089 to 132209547 19458 + lncRNA gene predicted gene, 29695
Tssr8720 1 132190413 to 132190438 25 + TSS region transcription start site region 8720
Lemd1 1 132190623 to 132257382 66759 + protein coding gene LEM domain containing 1
Tssr13630 1 132192018 to 132192031 13 - TSS region transcription start site region 13630
Mir135b 1 132198088 to 132198184 96 + miRNA gene microRNA 135b
Tssr13631 1 132200310 to 132200315 5 - TSS region transcription start site region 13631
1700037F24Rik 1 132201069 to 132203803 2734 - lincRNA gene RIKEN cDNA 1700037F24 gene
Cpgi724 1 132212410 to 132212582 172 CpG island CpG island 724
Tssr13632 1 132226150 to 132226190 40 - TSS region transcription start site region 13632
Tssr8721 1 132226313 to 132226348 35 + TSS region transcription start site region 8721
Gm10188 1 132229048 to 132229767 719 - protein coding gene predicted gene 10188
Tssr8722 1 132265989 to 132265993 4 + TSS region transcription start site region 8722
Gm29630 1 132274716 to 132280411 5695 - lincRNA gene predicted gene 29630
Gm38446 1 132278515 to 132291366 12851 - lncRNA gene predicted gene, 38446
Gm7241 1 132284453 to 132284809 356 + pseudogene predicted pseudogene 7241
Cpgi725 1 132298342 to 132299699 1357 CpG island CpG island 725
Tssr8723 1 132298498 to 132298505 7 + TSS region transcription start site region 8723
Tssr8724 1 132298550 to 132298561 11 + TSS region transcription start site region 8724
Tssr8725 1 132298570 to 132298600 30 + TSS region transcription start site region 8725
Tssr8726 1 132298606 to 132298631 25 + TSS region transcription start site region 8726
Klhdc8a 1 132298626 to 132307357 8731 + protein coding gene kelch domain containing 8A
Tssr8727 1 132298632 to 132298649 17 + TSS region transcription start site region 8727
Tssr8728 1 132298652 to 132298659 7 + TSS region transcription start site region 8728
Tssr8729 1 132298663 to 132298674 11 + TSS region transcription start site region 8729
Tssr8730 1 132299032 to 132299070 38 + TSS region transcription start site region 8730
Tssr8731 1 132299302 to 132299312 10 + TSS region transcription start site region 8731
Tssr8732 1 132299336 to 132299349 13 + TSS region transcription start site region 8732
Tssr8733 1 132302893 to 132302899 6 + TSS region transcription start site region 8733
Cpgi726 1 132315860 to 132316663 803 CpG island CpG island 726
Tssr8734 1 132316086 to 132316093 7 + TSS region transcription start site region 8734
Tssr8735 1 132316112 to 132316144 32 + TSS region transcription start site region 8735
Nuak2 1 132316126 to 132333488 17362 + protein coding gene NUAK family, SNF1-like kinase, 2
Tssr8736 1 132316200 to 132316211 11 + TSS region transcription start site region 8736
Gm30744 1 132321429 to 132323315 1886 - lncRNA gene predicted gene, 30744
Tssr8737 1 132329963 to 132329986 23 + TSS region transcription start site region 8737