Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:131857464-132007970

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi716 1 131867134 to 131867942 808 CpG island CpG island 716
Rab29 1 131867224 to 131872887 5663 + protein coding gene RAB29, member RAS oncogene family
Tssr8681 1 131867239 to 131867272 33 + TSS region transcription start site region 8681
Tssr8682 1 131867276 to 131867296 20 + TSS region transcription start site region 8682
Tssr8683 1 131867486 to 131867528 42 + TSS region transcription start site region 8683
Tssr8684 1 131867613 to 131867632 19 + TSS region transcription start site region 8684
Tssr8685 1 131867635 to 131867647 12 + TSS region transcription start site region 8685
Gm29105 1 131907165 to 131907954 789 + pseudogene predicted gene 29105
Cpgi717 1 131910228 to 131911647 1419 CpG island CpG island 717
Tssr13608 1 131910265 to 131910274 9 - TSS region transcription start site region 13608
Tssr8686 1 131910483 to 131910539 56 + TSS region transcription start site region 8686
Nucks1 1 131910534 to 131936321 25787 + protein coding gene nuclear casein kinase and cyclin-dependent kinase substrate 1
Tssr8687 1 131910558 to 131910572 14 + TSS region transcription start site region 8687
Tssr8688 1 131910679 to 131910702 23 + TSS region transcription start site region 8688
Tssr13609 1 131910850 to 131910867 17 - TSS region transcription start site region 13609
Tssr13610 1 131911107 to 131911125 18 - TSS region transcription start site region 13610
Tssr13611 1 131911126 to 131911145 19 - TSS region transcription start site region 13611
Gm38067 1 131914529 to 131916439 1910 + unclassified gene predicted gene, 38067
Tssr8689 1 131919009 to 131919022 13 + TSS region transcription start site region 8689
Tssr8690 1 131932019 to 131932037 18 + TSS region transcription start site region 8690
Tssr8691 1 131932045 to 131932052 7 + TSS region transcription start site region 8691
Tssr8692 1 131932071 to 131932085 14 + TSS region transcription start site region 8692
Tssr8693 1 131932118 to 131932134 16 + TSS region transcription start site region 8693
Gm37676 1 131932464 to 131932970 506 - unclassified gene predicted gene, 37676
Tssr8694 1 131935289 to 131935313 24 + TSS region transcription start site region 8694
D1Mit497 1 131958404 to 131958513 109 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 497
Cpgi718 1 131962497 to 131964047 1550 CpG island CpG island 718
Tssr8695 1 131962941 to 131962969 28 + TSS region transcription start site region 8695
Gm29103 1 131962954 to 132014486 51532 + unclassified non-coding RNA gene predicted gene 29103
Slc45a3 1 131962967 to 131982969 20002 + protein coding gene solute carrier family 45, member 3
Tssr8696 1 131962987 to 131963001 14 + TSS region transcription start site region 8696
Tssr8697 1 131969908 to 131969912 4 + TSS region transcription start site region 8697
Tssr8698 1 131970555 to 131970572 17 + TSS region transcription start site region 8698
Tssr8699 1 131970589 to 131970601 12 + TSS region transcription start site region 8699
Tssr8700 1 131974293 to 131974341 48 + TSS region transcription start site region 8700
Tssr13612 1 132007170 to 132007175 5 - TSS region transcription start site region 13612
Cpgi719 1 132007230 to 132008574 1344 CpG island CpG island 719
Tssr8701 1 132007378 to 132007392 14 + TSS region transcription start site region 8701
Tssr203 1 132007395 to 132007418 23 + TSS region transcription start site region 203
Tssr204 1 132007466 to 132007478 12 - TSS region transcription start site region 204
Tssr13613 1 132007480 to 132007503 23 - TSS region transcription start site region 13613
Tssr8702 1 132007554 to 132007591 37 + TSS region transcription start site region 8702
Elk4 1 132007605 to 132026448 18843 + protein coding gene ELK4, member of ETS oncogene family
Tssr8703 1 132007606 to 132007634 28 + TSS region transcription start site region 8703
Tssr8704 1 132007640 to 132007673 33 + TSS region transcription start site region 8704
Tssr205 1 132007889 to 132007903 14 - TSS region transcription start site region 205
Tssr206 1 132007906 to 132007917 11 - TSS region transcription start site region 206
Tssr13614 1 132007919 to 132007943 24 - TSS region transcription start site region 13614