Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:131507262-131837277

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srgap2 1 131285251 to 131527352 242101 - protein coding gene SLIT-ROBO Rho GTPase activating protein 2
Tssr13586 1 131511423 to 131511433 10 - TSS region transcription start site region 13586
Tssr13587 1 131514224 to 131514238 14 - TSS region transcription start site region 13587
Tssr13588 1 131520706 to 131520710 4 - TSS region transcription start site region 13588
Tssr13589 1 131525140 to 131525162 22 - TSS region transcription start site region 13589
Tssr13590 1 131525169 to 131525232 63 - TSS region transcription start site region 13590
Cpgi711 1 131525181 to 131528641 3460 CpG island CpG island 711
Tssr13591 1 131525243 to 131525259 16 - TSS region transcription start site region 13591
Tssr8627 1 131525266 to 131525279 13 + TSS region transcription start site region 8627
Tssr13592 1 131525311 to 131525351 40 - TSS region transcription start site region 13592
Tssr13593 1 131525411 to 131525428 17 - TSS region transcription start site region 13593
Tssr8628 1 131525422 to 131525453 31 + TSS region transcription start site region 8628
Tssr13594 1 131525521 to 131525538 17 - TSS region transcription start site region 13594
Tssr13595 1 131525557 to 131525585 28 - TSS region transcription start site region 13595
Tssr13596 1 131525591 to 131525618 27 - TSS region transcription start site region 13596
Tssr13597 1 131525836 to 131525847 11 - TSS region transcription start site region 13597
Tssr13598 1 131526475 to 131526548 73 - TSS region transcription start site region 13598
Tssr13599 1 131526556 to 131526590 34 - TSS region transcription start site region 13599
Tssr13600 1 131526725 to 131526745 20 - TSS region transcription start site region 13600
Tssr13601 1 131527266 to 131527293 27 - TSS region transcription start site region 13601
Tssr13602 1 131527302 to 131527385 83 - TSS region transcription start site region 13602
Tssr13603 1 131527523 to 131527540 17 - TSS region transcription start site region 13603
Tssr8629 1 131527858 to 131527871 13 + TSS region transcription start site region 8629
Tssr8630 1 131527901 to 131527911 10 + TSS region transcription start site region 8630
Fam72a 1 131527903 to 131539035 11132 + protein coding gene family with sequence similarity 72, member A
Tssr8631 1 131527980 to 131528002 22 + TSS region transcription start site region 8631
Tssr8632 1 131528361 to 131528376 15 + TSS region transcription start site region 8632
Cpgi712 1 131555314 to 131555538 224 CpG island CpG island 712
Tssr8633 1 131562950 to 131562953 3 + TSS region transcription start site region 8633
Tssr8634 1 131573843 to 131573847 4 + TSS region transcription start site region 8634
Avpr1b 1 131599239 to 131612000 12761 + protein coding gene arginine vasopressin receptor 1B
Cpgi713 1 131599926 to 131600137 211 CpG island CpG island 713
Gm8532 1 131632509 to 131632969 460 - pseudogene predicted gene 8532
Tssr8635 1 131638270 to 131638296 26 + TSS region transcription start site region 8635
Tssr8636 1 131638306 to 131638338 32 + TSS region transcription start site region 8636
Ctse 1 131638314 to 131675507 37193 + protein coding gene cathepsin E
Tssr8637 1 131638354 to 131638363 9 + TSS region transcription start site region 8637
Tssr8638 1 131638388 to 131638404 16 + TSS region transcription start site region 8638
Tssr8639 1 131638440 to 131638484 44 + TSS region transcription start site region 8639
Tssr8640 1 131638485 to 131638496 11 + TSS region transcription start site region 8640
Gm46156 1 131646887 to 131650331 3444 + protein coding gene predicted gene, 46156
Tssr8641 1 131661868 to 131661879 11 + TSS region transcription start site region 8641
Tssr8642 1 131661903 to 131661939 36 + TSS region transcription start site region 8642
Tssr8643 1 131661948 to 131661974 26 + TSS region transcription start site region 8643
Tssr8644 1 131672262 to 131672277 15 + TSS region transcription start site region 8644
Tssr8645 1 131672281 to 131672294 13 + TSS region transcription start site region 8645
Tssr8646 1 131674860 to 131674876 16 + TSS region transcription start site region 8646
Tssr8647 1 131674916 to 131674938 22 + TSS region transcription start site region 8647
Tssr8648 1 131674945 to 131674960 15 + TSS region transcription start site region 8648
Tssr8649 1 131675030 to 131675058 28 + TSS region transcription start site region 8649
Tssr8650 1 131675076 to 131675086 10 + TSS region transcription start site region 8650
Tssr13604 1 131688585 to 131688611 26 - TSS region transcription start site region 13604
Tssr8651 1 131688670 to 131688734 64 + TSS region transcription start site region 8651
Rab7b 1 131688695 to 131715439 26744 + protein coding gene RAB7B, member RAS oncogene family
Tssr8652 1 131688744 to 131688753 9 + TSS region transcription start site region 8652
Tssr8653 1 131688771 to 131688784 13 + TSS region transcription start site region 8653
Tssr8654 1 131696618 to 131696630 12 + TSS region transcription start site region 8654
Tssr8655 1 131696657 to 131696668 11 + TSS region transcription start site region 8655
Tssr8656 1 131712620 to 131712632 12 + TSS region transcription start site region 8656
Tssr8657 1 131712715 to 131712725 10 + TSS region transcription start site region 8657
Tssr8658 1 131712918 to 131712929 11 + TSS region transcription start site region 8658
Tssr8659 1 131713096 to 131713111 15 + TSS region transcription start site region 8659
Gm30104 1 131730239 to 131733668 3429 - lncRNA gene predicted gene, 30104
Tssr13605 1 131733532 to 131733548 16 - TSS region transcription start site region 13605
Tssr8660 1 131744011 to 131744029 18 + TSS region transcription start site region 8660
Slc26a9 1 131744022 to 131771504 27482 + protein coding gene solute carrier family 26, member 9
Tssr8661 1 131744178 to 131744195 17 + TSS region transcription start site region 8661
Tssr8662 1 131750381 to 131750386 5 + TSS region transcription start site region 8662
Tssr8663 1 131750485 to 131750494 9 + TSS region transcription start site region 8663
Tssr8664 1 131750506 to 131750519 13 + TSS region transcription start site region 8664
Tssr13606 1 131760157 to 131760164 7 - TSS region transcription start site region 13606
Tssr8665 1 131760319 to 131760327 8 + TSS region transcription start site region 8665
Tssr8666 1 131761557 to 131761563 6 + TSS region transcription start site region 8666
Tssr8667 1 131797383 to 131797418 35 + TSS region transcription start site region 8667
Pm20d1 1 131797384 to 131821419 24035 + protein coding gene peptidase M20 domain containing 1
Tssr8668 1 131797426 to 131797431 5 + TSS region transcription start site region 8668
Cpgi714 1 131797439 to 131797759 320 CpG island CpG island 714
Cpgi715 1 131827270 to 131828539 1269 CpG island CpG island 715
Tssr8669 1 131827520 to 131827537 17 + TSS region transcription start site region 8669
Tssr13607 1 131827815 to 131827840 25 - TSS region transcription start site region 13607
Tssr8670 1 131828002 to 131828019 17 + TSS region transcription start site region 8670
Slc41a1 1 131828012 to 131848863 20851 + protein coding gene solute carrier family 41, member 1
Tssr8671 1 131828032 to 131828049 17 + TSS region transcription start site region 8671
Tssr8672 1 131828057 to 131828066 9 + TSS region transcription start site region 8672
Tssr8673 1 131828073 to 131828079 6 + TSS region transcription start site region 8673
Tssr8674 1 131828315 to 131828341 26 + TSS region transcription start site region 8674
Tssr8675 1 131828343 to 131828363 20 + TSS region transcription start site region 8675
Tssr8676 1 131828986 to 131828992 6 + TSS region transcription start site region 8676