Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:131187169-131667173

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif2d 1 131153181 to 131187658 34477 + protein coding gene eukaryotic translation initiation factor 2D
Rassf5 1 131176410 to 131245178 68768 - protein coding gene Ras association (RalGDS/AF-6) domain family member 5
Cpgi708 1 131199803 to 131200014 211 CpG island CpG island 708
Tssr13558 1 131199919 to 131199928 9 - TSS region transcription start site region 13558
Tssr13559 1 131199932 to 131199952 20 - TSS region transcription start site region 13559
Tssr13560 1 131199959 to 131199975 16 - TSS region transcription start site region 13560
Tssr13561 1 131199987 to 131199992 5 - TSS region transcription start site region 13561
Tssr13562 1 131200089 to 131200145 56 - TSS region transcription start site region 13562
Tssr13563 1 131200166 to 131200177 11 - TSS region transcription start site region 13563
Tssr13564 1 131200181 to 131200188 7 - TSS region transcription start site region 13564
Tssr13565 1 131200204 to 131200215 11 - TSS region transcription start site region 13565
Tssr8624 1 131204699 to 131204739 40 + TSS region transcription start site region 8624
Gm17796 1 131216877 to 131218089 1212 + pseudogene predicted gene, 17796
Ity3 1 131228571 to 165311895 34083324 QTL immunity to S. typhimurium 3
D1Mit193 1 131228571 to 131228693 122 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 193
Tssr13566 1 131233660 to 131233679 19 - TSS region transcription start site region 13566
Cpgi709 1 131244097 to 131245843 1746 CpG island CpG island 709
Tssr13567 1 131245167 to 131245185 18 - TSS region transcription start site region 13567
Tssr8625 1 131245323 to 131245334 11 + TSS region transcription start site region 8625
Ikbke 1 131254600 to 131279629 25029 - protein coding gene inhibitor of kappaB kinase epsilon
Gm28914 1 131259507 to 131260553 1046 + antisense lncRNA gene predicted gene 28914
Gm28913 1 131263330 to 131266749 3419 + antisense lncRNA gene predicted gene 28913
Tssr13568 1 131271862 to 131271878 16 - TSS region transcription start site region 13568
Tssr13569 1 131273475 to 131273486 11 - TSS region transcription start site region 13569
Tssr13570 1 131275277 to 131275305 28 - TSS region transcription start site region 13570
Tssr8626 1 131275597 to 131275615 18 + TSS region transcription start site region 8626
Cpgi710 1 131275722 to 131275876 154 CpG island CpG island 710
Tssr13571 1 131276685 to 131276720 35 - TSS region transcription start site region 13571
Tssr13572 1 131276797 to 131276813 16 - TSS region transcription start site region 13572
Tssr13573 1 131276877 to 131276888 11 - TSS region transcription start site region 13573
Tssr13574 1 131276895 to 131276906 11 - TSS region transcription start site region 13574
Tssr13575 1 131276914 to 131276925 11 - TSS region transcription start site region 13575
Tssr13576 1 131278756 to 131278768 12 - TSS region transcription start site region 13576
Tssr13577 1 131279515 to 131279529 14 - TSS region transcription start site region 13577
Tssr13578 1 131279544 to 131279570 26 - TSS region transcription start site region 13578
Tssr13579 1 131281893 to 131281903 10 - TSS region transcription start site region 13579
Srgap2 1 131285251 to 131527352 242101 - protein coding gene SLIT-ROBO Rho GTPase activating protein 2
Gm38262 1 131341302 to 131342683 1381 - unclassified gene predicted gene, 38262
Gm37954 1 131376461 to 131378531 2070 - unclassified gene predicted gene, 37954
Gm29488 1 131406812 to 131409213 2401 - sense intronic lncRNA gene predicted gene 29488
Tssr13580 1 131424936 to 131424940 4 - TSS region transcription start site region 13580
Tssr13581 1 131427169 to 131427173 4 - TSS region transcription start site region 13581
Gm29487 1 131447440 to 131447695 255 - pseudogene predicted gene 29487
Tssr13582 1 131472621 to 131472629 8 - TSS region transcription start site region 13582
Tssr13583 1 131477835 to 131477854 19 - TSS region transcription start site region 13583
Tssr13584 1 131490268 to 131490272 4 - TSS region transcription start site region 13584
Tssr13585 1 131495389 to 131495416 27 - TSS region transcription start site region 13585
Gm24273 1 131498639 to 131498802 163 - miRNA gene predicted gene, 24273
Tssr13586 1 131511423 to 131511433 10 - TSS region transcription start site region 13586
Tssr13587 1 131514224 to 131514238 14 - TSS region transcription start site region 13587
Tssr13588 1 131520706 to 131520710 4 - TSS region transcription start site region 13588
Tssr13589 1 131525140 to 131525162 22 - TSS region transcription start site region 13589
Tssr13590 1 131525169 to 131525232 63 - TSS region transcription start site region 13590
Cpgi711 1 131525181 to 131528641 3460 CpG island CpG island 711
Tssr13591 1 131525243 to 131525259 16 - TSS region transcription start site region 13591
Tssr8627 1 131525266 to 131525279 13 + TSS region transcription start site region 8627
Tssr13592 1 131525311 to 131525351 40 - TSS region transcription start site region 13592
Tssr13593 1 131525411 to 131525428 17 - TSS region transcription start site region 13593
Tssr8628 1 131525422 to 131525453 31 + TSS region transcription start site region 8628
Tssr13594 1 131525521 to 131525538 17 - TSS region transcription start site region 13594
Tssr13595 1 131525557 to 131525585 28 - TSS region transcription start site region 13595
Tssr13596 1 131525591 to 131525618 27 - TSS region transcription start site region 13596
Tssr13597 1 131525836 to 131525847 11 - TSS region transcription start site region 13597
Tssr13598 1 131526475 to 131526548 73 - TSS region transcription start site region 13598
Tssr13599 1 131526556 to 131526590 34 - TSS region transcription start site region 13599
Tssr13600 1 131526725 to 131526745 20 - TSS region transcription start site region 13600
Tssr13601 1 131527266 to 131527293 27 - TSS region transcription start site region 13601
Tssr13602 1 131527302 to 131527385 83 - TSS region transcription start site region 13602
Tssr13603 1 131527523 to 131527540 17 - TSS region transcription start site region 13603
Tssr8629 1 131527858 to 131527871 13 + TSS region transcription start site region 8629
Tssr8630 1 131527901 to 131527911 10 + TSS region transcription start site region 8630
Fam72a 1 131527903 to 131539035 11132 + protein coding gene family with sequence similarity 72, member A
Tssr8631 1 131527980 to 131528002 22 + TSS region transcription start site region 8631
Tssr8632 1 131528361 to 131528376 15 + TSS region transcription start site region 8632
Cpgi712 1 131555314 to 131555538 224 CpG island CpG island 712
Tssr8633 1 131562950 to 131562953 3 + TSS region transcription start site region 8633
Tssr8634 1 131573843 to 131573847 4 + TSS region transcription start site region 8634
Avpr1b 1 131599239 to 131612000 12761 + protein coding gene arginine vasopressin receptor 1B
Cpgi713 1 131599926 to 131600137 211 CpG island CpG island 713
Gm8532 1 131632509 to 131632969 460 - pseudogene predicted gene 8532
Tssr8635 1 131638270 to 131638296 26 + TSS region transcription start site region 8635
Tssr8636 1 131638306 to 131638338 32 + TSS region transcription start site region 8636
Ctse 1 131638314 to 131675507 37193 + protein coding gene cathepsin E
Tssr8637 1 131638354 to 131638363 9 + TSS region transcription start site region 8637
Tssr8638 1 131638388 to 131638404 16 + TSS region transcription start site region 8638
Tssr8639 1 131638440 to 131638484 44 + TSS region transcription start site region 8639
Tssr8640 1 131638485 to 131638496 11 + TSS region transcription start site region 8640
Gm46156 1 131646887 to 131650331 3444 + protein coding gene predicted gene, 46156
Tssr8641 1 131661868 to 131661879 11 + TSS region transcription start site region 8641
Tssr8642 1 131661903 to 131661939 36 + TSS region transcription start site region 8642
Tssr8643 1 131661948 to 131661974 26 + TSS region transcription start site region 8643