Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:13117094-13317099

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prdm14	1	13113457 to 13127163	13706	-	protein coding gene	PR domain containing 14
Cpgi39	1	13126287 to 13126801	514		CpG island	CpG island 39
Tssr10982	1	13127223 to 13127249	26	-	TSS region	transcription start site region 10982
Cpgi40	1	13128471 to 13128722	251		CpG island	CpG island 40
Ncoa2	1	13139105 to 13374083	234978	-	protein coding gene	nuclear receptor coactivator 2
Tssr10983	1	13162483 to 13162516	33	-	TSS region	transcription start site region 10983
Tssr5963	1	13177142 to 13177145	3	+	TSS region	transcription start site region 5963
Gm38376	1	13177462 to 13179714	2252	-	unclassified gene	predicted gene, 38376
Tssr10984	1	13217094 to 13217099	5	-	TSS region	transcription start site region 10984
Tssr10985	1	13225928 to 13225947	19	-	TSS region	transcription start site region 10985
Tssr10986	1	13225957 to 13225970	13	-	TSS region	transcription start site region 10986
Gm37409	1	13234809 to 13236434	1625	-	unclassified gene	predicted gene, 37409
Tssr10987	1	13259526 to 13259530	4	-	TSS region	transcription start site region 10987
Gm27881	1	13262198 to 13262279	81	+	miRNA gene	predicted gene, 27881
Gm38223	1	13289812 to 13290506	694	-	unclassified gene	predicted gene, 38223
Gm37702	1	13297036 to 13298907	1871	-	unclassified gene	predicted gene, 37702
D1Mit67	1	13297384 to 13297523	139		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 67
Morph1	1	13297384 to 13297523	139		QTL	morphine antinociception 1
D1Mit66	1	13309638 to 13309794	156		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 66