Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:130624249-130834260

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zp3r 1 130576713 to 130629621 52908 - protein coding gene zona pellucida 3 receptor
Tssr13507 1 130629563 to 130629574 11 - TSS region transcription start site region 13507
Tssr199 1 130629578 to 130629581 3 - TSS region transcription start site region 199
Tssr13508 1 130629598 to 130629607 9 - TSS region transcription start site region 13508
Tssr13509 1 130629614 to 130629626 12 - TSS region transcription start site region 13509
C4bp 1 130635921 to 130661645 25724 - protein coding gene complement component 4 binding protein
Tssr13510 1 130647468 to 130647473 5 - TSS region transcription start site region 13510
D1Ertd273e 1 130651495 to 130651734 239 DNA segment DNA segment, Chr 1, ERATO Doi 273, expressed
Tssr13511 1 130661491 to 130661511 20 - TSS region transcription start site region 13511
Tssr13512 1 130661524 to 130661539 15 - TSS region transcription start site region 13512
Tssr13513 1 130661553 to 130661564 11 - TSS region transcription start site region 13513
Tssr13514 1 130661565 to 130661583 18 - TSS region transcription start site region 13514
Tssr13515 1 130661584 to 130661609 25 - TSS region transcription start site region 13515
Tssr13516 1 130661613 to 130661637 24 - TSS region transcription start site region 13516
Tssr13517 1 130661654 to 130661663 9 - TSS region transcription start site region 13517
C4bp-ps1 1 130670202 to 130681571 11369 - pseudogene complement component 4 binding protein, pseudogene 1
Gm29427 1 130670209 to 130715799 45590 - protein coding gene predicted gene 29427
Pfkfb2 1 130689182 to 130729253 40071 - protein coding gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
Cpgi702 1 130715513 to 130716009 496 CpG island CpG island 702
Tssr13518 1 130715772 to 130715825 53 - TSS region transcription start site region 13518
Tssr13519 1 130715827 to 130715848 21 - TSS region transcription start site region 13519
Tssr13520 1 130716005 to 130716032 27 - TSS region transcription start site region 13520
Tssr8560 1 130716130 to 130716171 41 + TSS region transcription start site region 8560
Cpgi703 1 130716572 to 130717980 1408 CpG island CpG island 703
Tssr13521 1 130716934 to 130716975 41 - TSS region transcription start site region 13521
Tssr8561 1 130717060 to 130717080 20 + TSS region transcription start site region 8561
Tssr8562 1 130717084 to 130717098 14 + TSS region transcription start site region 8562
Tssr8563 1 130717320 to 130717333 13 + TSS region transcription start site region 8563
Yod1 1 130717327 to 130722073 4746 + protein coding gene YOD1 deubiquitinase
Tssr8564 1 130717502 to 130717561 59 + TSS region transcription start site region 8564
Gm37163 1 130727132 to 130728821 1689 - unclassified gene predicted gene, 37163
Tssr13522 1 130729249 to 130729260 11 - TSS region transcription start site region 13522
Tssr8565 1 130731963 to 130731991 28 + TSS region transcription start site region 8565
AA986860 1 130731976 to 130744622 12646 + protein coding gene expressed sequence AA986860
Tssr8566 1 130732041 to 130732052 11 + TSS region transcription start site region 8566
Tssr8567 1 130732094 to 130732101 7 + TSS region transcription start site region 8567
Tssr8568 1 130732103 to 130732135 32 + TSS region transcription start site region 8568
Tssr13523 1 130732618 to 130732622 4 - TSS region transcription start site region 13523
Tssr13524 1 130733850 to 130733853 3 - TSS region transcription start site region 13524
Gm28857 1 130740162 to 130741327 1165 - antisense lncRNA gene predicted gene 28857
Tssr13525 1 130741286 to 130741296 10 - TSS region transcription start site region 13525
Tssr13526 1 130764072 to 130764083 11 - TSS region transcription start site region 13526
Tssr13527 1 130764095 to 130764109 14 - TSS region transcription start site region 13527
Tssr8569 1 130764971 to 130764988 17 + TSS region transcription start site region 8569
Gm28856 1 130766384 to 130784433 18049 + lincRNA gene predicted gene 28856
Tssr13528 1 130780012 to 130780020 8 - TSS region transcription start site region 13528
Tssr8570 1 130800635 to 130800640 5 + TSS region transcription start site region 8570
Fcamr 1 130800902 to 130814740 13838 + protein coding gene Fc receptor, IgA, IgM, high affinity
Tssr8571 1 130803082 to 130803091 9 + TSS region transcription start site region 8571
Gm15848 1 130809979 to 130818910 8931 - antisense lncRNA gene predicted gene 15848
Tssr13529 1 130820706 to 130820729 23 - TSS region transcription start site region 13529
Tssr8572 1 130826659 to 130826665 6 + TSS region transcription start site region 8572
Tssr8573 1 130826676 to 130826755 79 + TSS region transcription start site region 8573
Pigr 1 130826684 to 130852249 25565 + protein coding gene polymeric immunoglobulin receptor
Tssr8574 1 130826762 to 130826769 7 + TSS region transcription start site region 8574
Tssr200 1 130832064 to 130832068 4 - TSS region transcription start site region 200