Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:129458162-130431033

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thsd7b 1 129273304 to 130219278 945974 + protein coding gene thrombospondin, type I, domain containing 7B
Tssr13489 1 129550314 to 129550340 26 - TSS region transcription start site region 13489
Cpgi700 1 129595479 to 129595663 184 CpG island CpG island 700
Gm36347 1 129608725 to 129616189 7464 - lncRNA gene predicted gene, 36347
Tssr13490 1 129616192 to 129616246 54 - TSS region transcription start site region 13490
Tssr13491 1 129680638 to 129680643 5 - TSS region transcription start site region 13491
Tssr13492 1 129680686 to 129680711 25 - TSS region transcription start site region 13492
Tssr8551 1 129680996 to 129681007 11 + TSS region transcription start site region 8551
Gm36951 1 129710543 to 129713229 2686 + unclassified gene predicted gene, 36951
D1Mit229 1 129747076 to 129747214 138 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 229
Gm15790 1 129796608 to 129797858 1250 - pseudogene predicted pseudogene 15790
Rpl31-ps9 1 129801387 to 129801764 377 - pseudogene ribosomal protein L31, pseudogene 9
Gm37479 1 129833148 to 129836988 3840 + unclassified gene predicted gene, 37479
Gm37064 1 129860815 to 129863045 2230 + unclassified gene predicted gene, 37064
Gm37278 1 129943162 to 129946033 2871 + unclassified gene predicted gene, 37278
Tssr8552 1 130163827 to 130163834 7 + TSS region transcription start site region 8552
Tssr8553 1 130163856 to 130163867 11 + TSS region transcription start site region 8553
Gm29428 1 130195980 to 130196388 408 + pseudogene predicted gene 29428
Gm16081 1 130269950 to 130281258 11308 - lincRNA gene predicted gene 16081
Gm41951 1 130302361 to 130308831 6470 + lncRNA gene predicted gene, 41951
Cd55b 1 130388537 to 130423009 34472 - protein coding gene CD55 molecule, decay accelerating factor for complement B
Tssr13493 1 130422719 to 130422739 20 - TSS region transcription start site region 13493
Tssr13494 1 130422747 to 130422759 12 - TSS region transcription start site region 13494
Tssr13495 1 130422770 to 130422792 22 - TSS region transcription start site region 13495
Gm15674 1 130422824 to 130437914 15090 + antisense lncRNA gene predicted gene 15674
Tssr13496 1 130423022 to 130423065 43 - TSS region transcription start site region 13496
Tssr13497 1 130423066 to 130423082 16 - TSS region transcription start site region 13497
Gm15675 1 130429781 to 130437191 7410 - lincRNA gene predicted gene 15675