Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:128700970-129301101

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr8542 1 128705429 to 128705442 13 + TSS region transcription start site region 8542
Tssr8543 1 128705468 to 128705493 25 + TSS region transcription start site region 8543
Tssr8544 1 128705743 to 128705758 15 + TSS region transcription start site region 8544
Tssr13484 1 128712835 to 128712846 11 - TSS region transcription start site region 13484
Tssr13485 1 128712847 to 128712865 18 - TSS region transcription start site region 13485
Tssr197 1 128712970 to 128712994 24 - TSS region transcription start site region 197
Tssr8545 1 128713189 to 128713198 9 + TSS region transcription start site region 8545
Tssr13486 1 128730043 to 128730069 26 - TSS region transcription start site region 13486
Tssr13487 1 128747538 to 128747551 13 - TSS region transcription start site region 13487
Tssr8546 1 128747680 to 128747700 20 + TSS region transcription start site region 8546
Gm29599 1 128750926 to 128751347 421 + pseudogene predicted gene 29599
Tssr13488 1 128766891 to 128766895 4 - TSS region transcription start site region 13488
Tssr198 1 128767188 to 128767195 7 + TSS region transcription start site region 198
Gm26686 1 128770599 to 128774421 3822 - lincRNA gene predicted gene, 26686
Tssr8547 1 128787549 to 128787581 32 + TSS region transcription start site region 8547
D1Mit344 1 128842889 to 128843026 137 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 344
D1Mit344.1 1 128843022 to 128843132 110 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 344.1
Gm23056 1 128885909 to 128886019 110 - snRNA gene predicted gene, 23056
D1Mit263 1 129000970 to 129001101 131 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 263
D1Mit1001 1 129047558 to 129047688 130 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1001
D1Nds1 1 129203268 to 129203348 80 DNA segment DNA segment, Chr 1, Nuffield Department of Surgery 1
Sbw1 1 129203268 to 129203348 80 QTL splenomegaly-NZB x NZW 1
D1Mit262 1 129268518 to 129268667 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 262
D1Mit262.1 1 129268628 to 129268761 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 262.1
Cpgi699 1 129273117 to 129273820 703 CpG island CpG island 699
Thsd7b 1 129273304 to 130219278 945974 + protein coding gene thrombospondin, type I, domain containing 7B
Tssr8548 1 129273436 to 129273470 34 + TSS region transcription start site region 8548
Tssr8549 1 129273471 to 129273482 11 + TSS region transcription start site region 8549
Tssr8550 1 129273491 to 129273498 7 + TSS region transcription start site region 8550
Gm38240 1 129283107 to 129285593 2486 + unclassified gene predicted gene, 38240