Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:128405040-128575173

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dars 1 128363707 to 128417368 53661 - protein coding gene aspartyl-tRNA synthetase
Tssr13453 1 128414023 to 128414028 5 - TSS region transcription start site region 13453
Cpgi695 1 128416690 to 128417558 868 CpG island CpG island 695
Tssr13454 1 128417221 to 128417230 9 - TSS region transcription start site region 13454
Tssr13455 1 128417235 to 128417246 11 - TSS region transcription start site region 13455
Tssr13456 1 128417272 to 128417283 11 - TSS region transcription start site region 13456
Tssr193 1 128417294 to 128417305 11 - TSS region transcription start site region 193
Tssr13457 1 128417316 to 128417350 34 - TSS region transcription start site region 13457
Tssr13458 1 128417352 to 128417384 32 - TSS region transcription start site region 13458
Tssr13459 1 128447272 to 128447284 12 - TSS region transcription start site region 13459
Cpgi696 1 128472492 to 128472668 176 CpG island CpG island 696
Gm23902 1 128490040 to 128490173 133 + snoRNA gene predicted gene, 23902
Gm29598 1 128493845 to 128494432 587 - pseudogene predicted gene 29598
Gm29597 1 128514810 to 128515117 307 - pseudogene predicted gene 29597
Gm25384 1 128515115 to 128515219 104 - snRNA gene predicted gene, 25384
Gm6170 1 128520073 to 128521460 1387 - pseudogene predicted gene 6170
Gm41950 1 128542355 to 128549406 7051 + lncRNA gene predicted gene, 41950
D1Mit99 1 128551085 to 128551281 196 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 99
D1Mit286 1 128551097 to 128551241 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 286
Tssr13460 1 128561618 to 128561621 3 - TSS region transcription start site region 13460
Tssr194 1 128570052 to 128570061 9 - TSS region transcription start site region 194
Tssr8535 1 128570564 to 128570607 43 + TSS region transcription start site region 8535