Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:127715253-127955031

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35993	1	127693611 to 127732964	39353	-	lncRNA gene	predicted gene, 35993
Tssr8485	1	127729405 to 127729418	13	+	TSS region	transcription start site region 8485
Acmsd	1	127729413 to 127767564	38151	+	protein coding gene	amino carboxymuconate semialdehyde decarboxylase
Tssr8486	1	127729430 to 127729435	5	+	TSS region	transcription start site region 8486
Tssr8487	1	127731348 to 127731382	34	+	TSS region	transcription start site region 8487
Tssr13425	1	127732525 to 127732556	31	-	TSS region	transcription start site region 13425
Tssr13426	1	127732557 to 127732572	15	-	TSS region	transcription start site region 13426
Tssr13427	1	127732577 to 127732629	52	-	TSS region	transcription start site region 13427
Tssr13428	1	127732931 to 127732977	46	-	TSS region	transcription start site region 13428
2900009J06Rik	1	127753617 to 127774054	20437	-	antisense lncRNA gene	RIKEN cDNA 2900009J06 gene
Tssr8488	1	127756751 to 127756763	12	+	TSS region	transcription start site region 8488
Cpgi690	1	127773829 to 127774937	1108		CpG island	CpG island 690
Ccnt2	1	127774164 to 127804837	30673	+	protein coding gene	cyclin T2
Tssr8489	1	127774183 to 127774238	55	+	TSS region	transcription start site region 8489
Tssr8490	1	127774241 to 127774272	31	+	TSS region	transcription start site region 8490
Tssr8491	1	127783584 to 127783594	10	+	TSS region	transcription start site region 8491
Tssr8492	1	127793479 to 127793481	2	+	TSS region	transcription start site region 8492
Tssr8493	1	127797522 to 127797527	5	+	TSS region	transcription start site region 8493
Map3k19	1	127815253 to 127855031	39778	-	protein coding gene	mitogen-activated protein kinase kinase kinase 19
D1Ertd57e	1	127851557 to 127851767	210		DNA segment	DNA segment, Chr 1, ERATO Doi 57, expressed
Tssr13429	1	127854996 to 127855030	34	-	TSS region	transcription start site region 13429
Tssr13430	1	127859029 to 127859045	16	-	TSS region	transcription start site region 13430
Cpgi691	1	127868619 to 127869251	632		CpG island	CpG island 691
Tssr8494	1	127868771 to 127868780	9	+	TSS region	transcription start site region 8494
Rab3gap1	1	127868773 to 127943868	75095	+	protein coding gene	RAB3 GTPase activating protein subunit 1
Tssr8495	1	127868784 to 127868807	23	+	TSS region	transcription start site region 8495
Tssr13431	1	127896964 to 127896969	5	-	TSS region	transcription start site region 13431
Zranb3	1	127954184 to 128103047	148863	-	protein coding gene	zinc finger, RAN-binding domain containing 3