Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:127527577-127937629

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem163 1 127490342 to 127679621 189279 - protein coding gene transmembrane protein 163
Tssr13420 1 127537439 to 127537446 7 - TSS region transcription start site region 13420
Tssr13421 1 127577833 to 127577834 1 - TSS region transcription start site region 13421
Obq17 1 127625442 to 127625561 119 QTL obesity QTL 17
D1Mit495 1 127625442 to 127625561 119 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 495
Bglu12 1 127625442 to 127625561 119 QTL blood glucose level 12
Cpgi689 1 127676670 to 127678421 1751 CpG island CpG island 689
Tssr13422 1 127677745 to 127677798 53 - TSS region transcription start site region 13422
Tssr13423 1 127677882 to 127677897 15 - TSS region transcription start site region 13423
Tssr13424 1 127677923 to 127677956 33 - TSS region transcription start site region 13424
Gm35993 1 127693611 to 127732964 39353 - lncRNA gene predicted gene, 35993
Tssr8485 1 127729405 to 127729418 13 + TSS region transcription start site region 8485
Acmsd 1 127729413 to 127767564 38151 + protein coding gene amino carboxymuconate semialdehyde decarboxylase
Tssr8486 1 127729430 to 127729435 5 + TSS region transcription start site region 8486
Tssr8487 1 127731348 to 127731382 34 + TSS region transcription start site region 8487
Tssr13425 1 127732525 to 127732556 31 - TSS region transcription start site region 13425
Tssr13426 1 127732557 to 127732572 15 - TSS region transcription start site region 13426
Tssr13427 1 127732577 to 127732629 52 - TSS region transcription start site region 13427
Tssr13428 1 127732931 to 127732977 46 - TSS region transcription start site region 13428
2900009J06Rik 1 127753617 to 127774054 20437 - antisense lncRNA gene RIKEN cDNA 2900009J06 gene
Tssr8488 1 127756751 to 127756763 12 + TSS region transcription start site region 8488
Cpgi690 1 127773829 to 127774937 1108 CpG island CpG island 690
Ccnt2 1 127774164 to 127804837 30673 + protein coding gene cyclin T2
Tssr8489 1 127774183 to 127774238 55 + TSS region transcription start site region 8489
Tssr8490 1 127774241 to 127774272 31 + TSS region transcription start site region 8490
Tssr8491 1 127783584 to 127783594 10 + TSS region transcription start site region 8491
Tssr8492 1 127793479 to 127793481 2 + TSS region transcription start site region 8492
Tssr8493 1 127797522 to 127797527 5 + TSS region transcription start site region 8493
Map3k19 1 127815253 to 127855031 39778 - protein coding gene mitogen-activated protein kinase kinase kinase 19
D1Ertd57e 1 127851557 to 127851767 210 DNA segment DNA segment, Chr 1, ERATO Doi 57, expressed
Tssr13429 1 127854996 to 127855030 34 - TSS region transcription start site region 13429
Tssr13430 1 127859029 to 127859045 16 - TSS region transcription start site region 13430
Cpgi691 1 127868619 to 127869251 632 CpG island CpG island 691
Tssr8494 1 127868771 to 127868780 9 + TSS region transcription start site region 8494
Rab3gap1 1 127868773 to 127943868 75095 + protein coding gene RAB3 GTPase activating protein subunit 1
Tssr8495 1 127868784 to 127868807 23 + TSS region transcription start site region 8495
Tssr13431 1 127896964 to 127896969 5 - TSS region transcription start site region 13431