Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:127390342-127778021

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mgat5	1	127205015 to 127488336	283321	+	protein coding gene	mannoside acetylglucosaminyltransferase 5
Gm38301	1	127406776 to 127407318	542	+	unclassified gene	predicted gene, 38301
Tssr13419	1	127425185 to 127425191	6	-	TSS region	transcription start site region 13419
D1Mit218.2	1	127440002 to 127440117	115		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 218.2
D1Mit218	1	127440110 to 127440254	144		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 218
Gm41947	1	127451772 to 127477965	26193	-	lncRNA gene	predicted gene, 41947
Tssr8482	1	127483029 to 127483033	4	+	TSS region	transcription start site region 8482
Tssr8483	1	127486724 to 127486750	26	+	TSS region	transcription start site region 8483
Tssr8484	1	127487616 to 127487617	1	+	TSS region	transcription start site region 8484
Tmem163	1	127490342 to 127679621	189279	-	protein coding gene	transmembrane protein 163
Tssr13420	1	127537439 to 127537446	7	-	TSS region	transcription start site region 13420
Tssr13421	1	127577833 to 127577834	1	-	TSS region	transcription start site region 13421
Obq17	1	127625442 to 127625561	119		QTL	obesity QTL 17
D1Mit495	1	127625442 to 127625561	119		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 495
Bglu12	1	127625442 to 127625561	119		QTL	blood glucose level 12
Cpgi689	1	127676670 to 127678421	1751		CpG island	CpG island 689
Tssr13422	1	127677745 to 127677798	53	-	TSS region	transcription start site region 13422
Tssr13423	1	127677882 to 127677897	15	-	TSS region	transcription start site region 13423
Tssr13424	1	127677923 to 127677956	33	-	TSS region	transcription start site region 13424
Gm35993	1	127693611 to 127732964	39353	-	lncRNA gene	predicted gene, 35993
Tssr8485	1	127729405 to 127729418	13	+	TSS region	transcription start site region 8485
Acmsd	1	127729413 to 127767564	38151	+	protein coding gene	amino carboxymuconate semialdehyde decarboxylase
Tssr8486	1	127729430 to 127729435	5	+	TSS region	transcription start site region 8486
Tssr8487	1	127731348 to 127731382	34	+	TSS region	transcription start site region 8487
Tssr13425	1	127732525 to 127732556	31	-	TSS region	transcription start site region 13425
Tssr13426	1	127732557 to 127732572	15	-	TSS region	transcription start site region 13426
Tssr13427	1	127732577 to 127732629	52	-	TSS region	transcription start site region 13427
Tssr13428	1	127732931 to 127732977	46	-	TSS region	transcription start site region 13428
2900009J06Rik	1	127753617 to 127774054	20437	-	antisense lncRNA gene	RIKEN cDNA 2900009J06 gene
Tssr8488	1	127756751 to 127756763	12	+	TSS region	transcription start site region 8488
Cpgi690	1	127773829 to 127774937	1108		CpG island	CpG island 690
Ccnt2	1	127774164 to 127804837	30673	+	protein coding gene	cyclin T2
Tssr8489	1	127774183 to 127774238	55	+	TSS region	transcription start site region 8489
Tssr8490	1	127774241 to 127774272	31	+	TSS region	transcription start site region 8490