Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:126697786-127287791

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nckap5 1 125913620 to 126830799 917179 - protein coding gene NCK-associated protein 5
D1Mit494 1 126710525 to 126710742 217 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 494
Melm1 1 126710525 to 126710742 217 QTL melanoma modifier 1
Tssr13409 1 126738153 to 126738163 10 - TSS region transcription start site region 13409
Tssr13410 1 126738167 to 126738230 63 - TSS region transcription start site region 13410
Tssr190 1 126824742 to 126824747 5 - TSS region transcription start site region 190
Tssr13411 1 126830371 to 126830389 18 - TSS region transcription start site region 13411
Tssr13412 1 126830428 to 126830437 9 - TSS region transcription start site region 13412
Tssr13413 1 126830733 to 126830778 45 - TSS region transcription start site region 13413
Tssr13414 1 126830786 to 126830798 12 - TSS region transcription start site region 13414
Tssr8459 1 126844446 to 126844448 2 + TSS region transcription start site region 8459
4930599A14Rik 1 126872203 to 126876615 4412 - lincRNA gene RIKEN cDNA 4930599A14 gene
Tssr8460 1 126992786 to 126992791 5 + TSS region transcription start site region 8460
Gm41945 1 127016342 to 127023311 6969 - lncRNA gene predicted gene, 41945
Gm5261 1 127049984 to 127050696 712 - pseudogene predicted gene 5261
Cpgi688 1 127204827 to 127206649 1822 CpG island CpG island 688
Tssr8461 1 127204989 to 127205051 62 + TSS region transcription start site region 8461
Mgat5 1 127205015 to 127488336 283321 + protein coding gene mannoside acetylglucosaminyltransferase 5
Tssr8462 1 127205197 to 127205294 97 + TSS region transcription start site region 8462
Tssr8463 1 127205299 to 127205319 20 + TSS region transcription start site region 8463
Tssr8464 1 127205347 to 127205405 58 + TSS region transcription start site region 8464
Tssr13415 1 127206061 to 127206082 21 - TSS region transcription start site region 13415
Tssr191 1 127206585 to 127206623 38 + TSS region transcription start site region 191
Tssr13416 1 127207266 to 127207272 6 - TSS region transcription start site region 13416
Tssr8465 1 127209744 to 127209748 4 + TSS region transcription start site region 8465
Tssr8466 1 127213331 to 127213362 31 + TSS region transcription start site region 8466
Tssr8467 1 127213412 to 127213430 18 + TSS region transcription start site region 8467
Tssr8468 1 127228609 to 127228617 8 + TSS region transcription start site region 8468
Tssr8469 1 127228660 to 127228670 10 + TSS region transcription start site region 8469
Gm37772 1 127242091 to 127243484 1393 + unclassified gene predicted gene, 37772
Tssr13417 1 127242161 to 127242190 29 - TSS region transcription start site region 13417
Tssr13418 1 127242244 to 127242274 30 - TSS region transcription start site region 13418
Gm37510 1 127270524 to 127275285 4761 + unclassified gene predicted gene, 37510
Tssr8470 1 127273624 to 127273635 11 + TSS region transcription start site region 8470
Gm8451 1 127282662 to 127283108 446 - pseudogene predicted gene 8451