Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:125720140-126421461

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpr39 1 125676996 to 125873862 196866 + protein coding gene G protein-coupled receptor 39
Tssr8456 1 125780027 to 125780031 4 + TSS region transcription start site region 8456
Gm41943 1 125833973 to 125841726 7753 - lncRNA gene predicted gene, 41943
Tssr8457 1 125839960 to 125839972 12 + TSS region transcription start site region 8457
AI853363 1 125867621 to 125868218 597 unclassified gene expressed sequence AI853363
Lypd1 1 125867622 to 125913101 45479 - protein coding gene Ly6/Plaur domain containing 1
Cpgi686 1 125911169 to 125912846 1677 CpG island CpG island 686
Tssr13391 1 125912160 to 125912199 39 - TSS region transcription start site region 13391
Tssr13392 1 125913103 to 125913118 15 - TSS region transcription start site region 13392
Tssr13393 1 125913130 to 125913149 19 - TSS region transcription start site region 13393
Nckap5 1 125913620 to 126830799 917179 - protein coding gene NCK-associated protein 5
Gm37161 1 125919266 to 125921962 2696 - unclassified gene predicted gene, 37161
Tssr13394 1 125989249 to 125989252 3 - TSS region transcription start site region 13394
D1Mit192 1 125992919 to 125993052 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 192
Gm35562 1 126046689 to 126102537 55848 + lncRNA gene predicted gene, 35562
Gm37936 1 126070140 to 126071461 1321 - unclassified gene predicted gene, 37936
Tssr13395 1 126090477 to 126090479 2 - TSS region transcription start site region 13395
Tssr13396 1 126092513 to 126092517 4 - TSS region transcription start site region 13396
Tssr13397 1 126173789 to 126173791 2 - TSS region transcription start site region 13397
D1Mit94 1 126180271 to 126180424 153 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 94
D1Mit96 1 126246915 to 126247045 130 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 96
Tssr13398 1 126322425 to 126322428 3 - TSS region transcription start site region 13398
Gm38177 1 126323635 to 126324674 1039 - unclassified gene predicted gene, 38177