Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:125486996-126063862

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi685 1 125560169 to 125561567 1398 CpG island CpG island 685
Slc35f5 1 125560595 to 125595820 35225 + protein coding gene solute carrier family 35, member F5
Tssr8442 1 125561010 to 125561095 85 + TSS region transcription start site region 8442
Tssr8443 1 125561101 to 125561122 21 + TSS region transcription start site region 8443
Tssr13390 1 125561438 to 125561458 20 - TSS region transcription start site region 13390
Gm18444 1 125667988 to 125668616 628 - pseudogene predicted gene, 18444
D1Mit138 1 125668929 to 125669178 249 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 138
D1Mit138.1 1 125669023 to 125669187 164 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 138.1
Tssr8444 1 125676848 to 125676855 7 + TSS region transcription start site region 8444
Tssr8445 1 125676861 to 125676874 13 + TSS region transcription start site region 8445
Tssr8446 1 125676885 to 125676895 10 + TSS region transcription start site region 8446
Tssr8447 1 125676969 to 125677015 46 + TSS region transcription start site region 8447
Gpr39 1 125676996 to 125873862 196866 + protein coding gene G protein-coupled receptor 39
Tssr8448 1 125677020 to 125677075 55 + TSS region transcription start site region 8448
Tssr189 1 125677095 to 125677102 7 + TSS region transcription start site region 189
Tssr8449 1 125677113 to 125677122 9 + TSS region transcription start site region 8449
Tssr8450 1 125677131 to 125677142 11 + TSS region transcription start site region 8450
Tssr8451 1 125677156 to 125677168 12 + TSS region transcription start site region 8451
Tssr8452 1 125677196 to 125677209 13 + TSS region transcription start site region 8452
Tssr8453 1 125677218 to 125677233 15 + TSS region transcription start site region 8453
Tssr8454 1 125677287 to 125677302 15 + TSS region transcription start site region 8454
Tssr8455 1 125677676 to 125677687 11 + TSS region transcription start site region 8455
D1Mit93 1 125685026 to 125685154 128 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 93
Tssr8456 1 125780027 to 125780031 4 + TSS region transcription start site region 8456
Gm41943 1 125833973 to 125841726 7753 - lncRNA gene predicted gene, 41943
Tssr8457 1 125839960 to 125839972 12 + TSS region transcription start site region 8457
AI853363 1 125867621 to 125868218 597 unclassified gene expressed sequence AI853363
Lypd1 1 125867622 to 125913101 45479 - protein coding gene Ly6/Plaur domain containing 1
Cpgi686 1 125911169 to 125912846 1677 CpG island CpG island 686
Tssr13391 1 125912160 to 125912199 39 - TSS region transcription start site region 13391
Tssr13392 1 125913103 to 125913118 15 - TSS region transcription start site region 13392
Tssr13393 1 125913130 to 125913149 19 - TSS region transcription start site region 13393
Nckap5 1 125913620 to 126830799 917179 - protein coding gene NCK-associated protein 5
Gm37161 1 125919266 to 125921962 2696 - unclassified gene predicted gene, 37161
Tssr13394 1 125989249 to 125989252 3 - TSS region transcription start site region 13394
D1Mit192 1 125992919 to 125993052 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 192
Gm35562 1 126046689 to 126102537 55848 + lncRNA gene predicted gene, 35562