Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:124090700-125570748

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108 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr13317 1 124100241 to 124100259 18 - TSS region transcription start site region 13317
Tssr13318 1 124110690 to 124110702 12 - TSS region transcription start site region 13318
Tssr13319 1 124202682 to 124202684 2 - TSS region transcription start site region 13319
Tssr13320 1 124208260 to 124208276 16 - TSS region transcription start site region 13320
Tssr13321 1 124208392 to 124208405 13 - TSS region transcription start site region 13321
Tssr13322 1 124208464 to 124208473 9 - TSS region transcription start site region 13322
Tssr13323 1 124240248 to 124240259 11 - TSS region transcription start site region 13323
Tssr13324 1 124278871 to 124278875 4 - TSS region transcription start site region 13324
Tssr187 1 124279202 to 124279206 4 + TSS region transcription start site region 187
Tssr8433 1 124305150 to 124305151 1 + TSS region transcription start site region 8433
Tssr13325 1 124307183 to 124307187 4 - TSS region transcription start site region 13325
Gm38073 1 124375578 to 124379242 3664 - unclassified gene predicted gene, 38073
Tssr13326 1 124375769 to 124375772 3 - TSS region transcription start site region 13326
Tssr13327 1 124414597 to 124414645 48 - TSS region transcription start site region 13327
Tssr13328 1 124419895 to 124419901 6 - TSS region transcription start site region 13328
Tssr13329 1 124423525 to 124423530 5 - TSS region transcription start site region 13329
Tssr13330 1 124423676 to 124423685 9 - TSS region transcription start site region 13330
Gm41941 1 124424233 to 124436936 12703 - lncRNA gene predicted gene, 41941
Tssr13331 1 124445672 to 124445698 26 - TSS region transcription start site region 13331
Tssr13332 1 124465332 to 124465348 16 - TSS region transcription start site region 13332
Tssr13333 1 124485676 to 124485679 3 - TSS region transcription start site region 13333
Tssr13334 1 124490318 to 124490333 15 - TSS region transcription start site region 13334
Gm25578 1 124490856 to 124490959 103 + snRNA gene predicted gene, 25578
Tssr13335 1 124490883 to 124490886 3 - TSS region transcription start site region 13335
Tssr13336 1 124504032 to 124504043 11 - TSS region transcription start site region 13336
Tssr13337 1 124504139 to 124504161 22 - TSS region transcription start site region 13337
Tssr13338 1 124504167 to 124504179 12 - TSS region transcription start site region 13338
Tssr13339 1 124504181 to 124504206 25 - TSS region transcription start site region 13339
Tssr13340 1 124504235 to 124504264 29 - TSS region transcription start site region 13340
Gm28928 1 124505757 to 124846039 340282 - lincRNA gene predicted gene 28928
Tssr13341 1 124507715 to 124507724 9 - TSS region transcription start site region 13341
Tssr13342 1 124507741 to 124507752 11 - TSS region transcription start site region 13342
Tssr13343 1 124536602 to 124536614 12 - TSS region transcription start site region 13343
Tssr13344 1 124564843 to 124564891 48 - TSS region transcription start site region 13344
D1Mit89 1 124569912 to 124570059 147 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 89
Bwq7 1 124570059 to 93013187 -31556872 QTL body weight, QTL 7
Tssr13345 1 124592292 to 124592294 2 - TSS region transcription start site region 13345
Tssr13346 1 124600919 to 124600922 3 - TSS region transcription start site region 13346
Tssr13347 1 124605732 to 124605763 31 - TSS region transcription start site region 13347
D1Mit90.1 1 124606597 to 124606786 189 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 90.1
Gm28299 1 124615191 to 124615596 405 - pseudogene predicted gene 28299
Tssr13348 1 124678308 to 124678312 4 - TSS region transcription start site region 13348
Tssr13349 1 124688039 to 124688043 4 - TSS region transcription start site region 13349
Tssr13350 1 124700570 to 124700574 4 - TSS region transcription start site region 13350
Tssr13351 1 124708187 to 124708192 5 - TSS region transcription start site region 13351
Tssr13352 1 124709028 to 124709054 26 - TSS region transcription start site region 13352
Tssr13353 1 124723004 to 124723020 16 - TSS region transcription start site region 13353
Tssr13354 1 124723325 to 124723344 19 - TSS region transcription start site region 13354
Tssr13355 1 124723353 to 124723360 7 - TSS region transcription start site region 13355
Tssr13356 1 124723375 to 124723382 7 - TSS region transcription start site region 13356
Tssr13357 1 124756315 to 124756324 9 - TSS region transcription start site region 13357
Tssr13358 1 124756405 to 124756415 10 - TSS region transcription start site region 13358
Tssr13359 1 124759919 to 124759930 11 - TSS region transcription start site region 13359
Tssr13360 1 124764390 to 124764391 1 - TSS region transcription start site region 13360
Tssr13361 1 124783799 to 124783821 22 - TSS region transcription start site region 13361
Tssr13362 1 124791544 to 124791591 47 - TSS region transcription start site region 13362
Tssr13363 1 124820495 to 124820532 37 - TSS region transcription start site region 13363
Gm37717 1 124824702 to 124827728 3026 - unclassified gene predicted gene, 37717
Tssr13364 1 124830700 to 124830748 48 - TSS region transcription start site region 13364
Tssr13365 1 124845894 to 124845949 55 - TSS region transcription start site region 13365
Tssr13366 1 124845960 to 124845971 11 - TSS region transcription start site region 13366
Tssr13367 1 124846006 to 124846021 15 - TSS region transcription start site region 13367
Tssr13368 1 124846023 to 124846026 3 - TSS region transcription start site region 13368
Tssr13369 1 124846031 to 124846042 11 - TSS region transcription start site region 13369
Tssr13370 1 124846068 to 124846075 7 - TSS region transcription start site region 13370
Tssr13371 1 124846084 to 124846091 7 - TSS region transcription start site region 13371
Tssr13372 1 124846115 to 124846128 13 - TSS region transcription start site region 13372
Gm35355 1 124846122 to 124858524 12402 + lncRNA gene predicted gene, 35355
D1Mit158 1 125023544 to 125023673 129 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 158
Tssr8434 1 125174884 to 125174896 12 + TSS region transcription start site region 8434
Tssr8435 1 125174903 to 125174924 21 + TSS region transcription start site region 8435
Tssr8436 1 125174925 to 125174932 7 + TSS region transcription start site region 8436
D1Mit92 1 125188888 to 125189037 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 92
1700121L03Rik 1 125190282 to 125197455 7173 - lincRNA gene RIKEN cDNA 1700121L03 gene
Tssr13373 1 125197451 to 125197489 38 - TSS region transcription start site region 13373
D1Mit95 1 125221421 to 125221610 189 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 95
D1Mit421 1 125274130 to 125274300 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 421
D1Mit421.1 1 125274282 to 125274454 172 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 421.1
Actr3 1 125392905 to 125435727 42822 - protein coding gene ARP3 actin-related protein 3
Tssr13374 1 125393766 to 125393777 11 - TSS region transcription start site region 13374
Tssr13375 1 125396580 to 125396593 13 - TSS region transcription start site region 13375
Tssr13376 1 125402816 to 125402839 23 - TSS region transcription start site region 13376
Tssr13377 1 125414723 to 125414736 13 - TSS region transcription start site region 13377
Tssr13378 1 125421989 to 125421997 8 - TSS region transcription start site region 13378
Tssr13379 1 125422161 to 125422176 15 - TSS region transcription start site region 13379
Tssr13380 1 125434526 to 125434537 11 - TSS region transcription start site region 13380
Tssr188 1 125434584 to 125434609 25 - TSS region transcription start site region 188
Cpgi684 1 125434656 to 125436152 1496 CpG island CpG island 684
Tssr8437 1 125434771 to 125434785 14 + TSS region transcription start site region 8437
Tssr13381 1 125434776 to 125434790 14 - TSS region transcription start site region 13381
Tssr8438 1 125434883 to 125434894 11 + TSS region transcription start site region 8438
Tssr13382 1 125435432 to 125435444 12 - TSS region transcription start site region 13382
Tssr13383 1 125435474 to 125435532 58 - TSS region transcription start site region 13383
Tssr13384 1 125435535 to 125435557 22 - TSS region transcription start site region 13384
Tssr13385 1 125435661 to 125435688 27 - TSS region transcription start site region 13385
Tssr13386 1 125435694 to 125435710 16 - TSS region transcription start site region 13386
Tssr13387 1 125435744 to 125435753 9 - TSS region transcription start site region 13387
Tssr13388 1 125435891 to 125435900 9 - TSS region transcription start site region 13388
Tssr8439 1 125435986 to 125436011 25 + TSS region transcription start site region 8439
Tssr8440 1 125438222 to 125438256 34 + TSS region transcription start site region 8440
Tssr8441 1 125444564 to 125444571 7 + TSS region transcription start site region 8441
Gm28706 1 125444567 to 125447398 2831 + lincRNA gene predicted gene 28706
Tssr13389 1 125450363 to 125450368 5 - TSS region transcription start site region 13389
Cpgi685 1 125560169 to 125561567 1398 CpG island CpG island 685
Slc35f5 1 125560595 to 125595820 35225 + protein coding gene solute carrier family 35, member F5
Tssr8442 1 125561010 to 125561095 85 + TSS region transcription start site region 8442
Tssr8443 1 125561101 to 125561122 21 + TSS region transcription start site region 8443
Tssr13390 1 125561438 to 125561458 20 - TSS region transcription start site region 13390