Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:121467906-121667952

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc93	1	121431067 to 121506460	75393	+	protein coding gene	coiled-coil domain containing 93
Tssr8427	1	121486943 to 121486948	5	+	TSS region	transcription start site region 8427
Tssr8428	1	121486949 to 121486961	12	+	TSS region	transcription start site region 8428
Tssr8429	1	121486970 to 121486980	10	+	TSS region	transcription start site region 8429
Gm15392	1	121489296 to 121493203	3907	-	antisense lncRNA gene	predicted gene 15392
Tssr8430	1	121495409 to 121495420	11	+	TSS region	transcription start site region 8430
Tssr8431	1	121495865 to 121495895	30	+	TSS region	transcription start site region 8431
Gm15393	1	121507585 to 121507803	218	-	pseudogene	predicted gene 15393
Htr5b	1	121509842 to 121528465	18623	-	protein coding gene	5-hydroxytryptamine (serotonin) receptor 5B
Gm8217	1	121520583 to 121521047	464	+	pseudogene	predicted gene 8217
Cpgi680	1	121527250 to 121528656	1406		CpG island	CpG island 680
Ddx18	1	121553835 to 121567980	14145	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Cpgi681	1	121567542 to 121568280	738		CpG island	CpG island 681
Tssr13296	1	121567635 to 121567656	21	-	TSS region	transcription start site region 13296
Tssr13297	1	121567657 to 121567726	69	-	TSS region	transcription start site region 13297
Tssr13298	1	121567895 to 121567905	10	-	TSS region	transcription start site region 13298
Tssr13299	1	121567906 to 121567952	46	-	TSS region	transcription start site region 13299
Gm28591	1	121645667 to 121645849	182	-	pseudogene	predicted gene 28591