Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:121438173-123668316

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc93 1 121431067 to 121506460 75393 + protein coding gene coiled-coil domain containing 93
Tssr8426 1 121462234 to 121462247 13 + TSS region transcription start site region 8426
Tssr8427 1 121486943 to 121486948 5 + TSS region transcription start site region 8427
Tssr8428 1 121486949 to 121486961 12 + TSS region transcription start site region 8428
Tssr8429 1 121486970 to 121486980 10 + TSS region transcription start site region 8429
Gm15392 1 121489296 to 121493203 3907 - antisense lncRNA gene predicted gene 15392
Tssr8430 1 121495409 to 121495420 11 + TSS region transcription start site region 8430
Tssr8431 1 121495865 to 121495895 30 + TSS region transcription start site region 8431
Gm15393 1 121507585 to 121507803 218 - pseudogene predicted gene 15393
Htr5b 1 121509842 to 121528465 18623 - protein coding gene 5-hydroxytryptamine (serotonin) receptor 5B
Gm8217 1 121520583 to 121521047 464 + pseudogene predicted gene 8217
Cpgi680 1 121527250 to 121528656 1406 CpG island CpG island 680
Ddx18 1 121553835 to 121567980 14145 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Cpgi681 1 121567542 to 121568280 738 CpG island CpG island 681
Tssr13296 1 121567635 to 121567656 21 - TSS region transcription start site region 13296
Tssr13297 1 121567657 to 121567726 69 - TSS region transcription start site region 13297
Tssr13298 1 121567895 to 121567905 10 - TSS region transcription start site region 13298
Tssr13299 1 121567906 to 121567952 46 - TSS region transcription start site region 13299
Gm28591 1 121645667 to 121645849 182 - pseudogene predicted gene 28591
Tssr8432 1 121706511 to 121706527 16 + TSS region transcription start site region 8432
Gm37920 1 121706515 to 121707263 748 + unclassified gene predicted gene, 37920
Gm15394 1 121969217 to 121970524 1307 - pseudogene predicted gene 15394
D1Mit343 1 121990010 to 121990128 118 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 343
D1Mit342 1 121990027 to 121990147 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 342
Gm8392 1 122190221 to 122191052 831 + pseudogene predicted gene 8392
D1Mit471 1 122200178 to 122200290 112 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-471
Gm26472 1 122201459 to 122201541 82 + miRNA gene predicted gene, 26472
Gm28590 1 122205145 to 122252180 47035 + lincRNA gene predicted gene 28590
Cpgi682 1 122357127 to 122357335 208 CpG island CpG island 682
Tssr13300 1 122357224 to 122357246 22 - TSS region transcription start site region 13300
Tssr186 1 122357301 to 122357328 27 - TSS region transcription start site region 186
Gm24547 1 122510549 to 122510697 148 + snRNA gene predicted gene, 24547
Gm36982 1 122521749 to 122522876 1127 + unclassified gene predicted gene, 36982
Gm25771 1 122553173 to 122553316 143 + snoRNA gene predicted gene, 25771
Gm29192 1 122810306 to 122810682 376 + pseudogene predicted gene 29192
Gm37970 1 122866042 to 122867773 1731 + unclassified gene predicted gene, 37970
D1Mit444 1 123074764 to 123074876 112 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 444
Gm8403 1 123147924 to 123149185 1261 - pseudogene predicted gene 8403
Gm28911 1 123205149 to 123205265 116 + pseudogene predicted gene 28911
Gm20058 1 123274139 to 123276771 2632 + pseudogene predicted gene, 20058
Gm28912 1 123287574 to 123287807 233 + pseudogene predicted gene 28912
Dpp10 1 123321471 to 124045559 724088 - protein coding gene dipeptidylpeptidase 10
Tssr13301 1 123340933 to 123340980 47 - TSS region transcription start site region 13301
Gm37478 1 123363740 to 123367234 3494 - unclassified gene predicted gene, 37478
Gm37221 1 123371172 to 123374178 3006 - unclassified gene predicted gene, 37221
Gm24791 1 123389801 to 123389931 130 - snoRNA gene predicted gene, 24791
Gm37066 1 123391111 to 123393171 2060 - unclassified gene predicted gene, 37066
D1Mit341 1 123423772 to 123423985 213 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 341
D1Mit311 1 123423774 to 123423922 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 311
Gm37781 1 123457234 to 123460451 3217 - unclassified gene predicted gene, 37781
Gm37396 1 123468450 to 123469944 1494 - unclassified gene predicted gene, 37396
Tssr13302 1 123470651 to 123470655 4 - TSS region transcription start site region 13302
Gm38263 1 123559383 to 123562441 3058 - unclassified gene predicted gene, 38263
Tssr13303 1 123623761 to 123623769 8 - TSS region transcription start site region 13303