Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:120130569-120550580

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
3110009E18Rik 1 120121187 to 120188189 67002 + protein coding gene RIKEN cDNA 3110009E18 gene
D1Mit191 1 120132775 to 120132974 199 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 191
Steap3 1 120226414 to 120271082 44668 - protein coding gene STEAP family member 3
Tssr13242 1 120258845 to 120258866 21 - TSS region transcription start site region 13242
Tssr13243 1 120258868 to 120258885 17 - TSS region transcription start site region 13243
Tssr13244 1 120258889 to 120258898 9 - TSS region transcription start site region 13244
Tssr8401 1 120261402 to 120261438 36 + TSS region transcription start site region 8401
Cpgi667 1 120264928 to 120265578 650 CpG island CpG island 667
Tssr13245 1 120265247 to 120265304 57 - TSS region transcription start site region 13245
Tssr13246 1 120265312 to 120265321 9 - TSS region transcription start site region 13246
Tssr13247 1 120265372 to 120265377 5 - TSS region transcription start site region 13247
Tssr13248 1 120270253 to 120270293 40 - TSS region transcription start site region 13248
Tssr13249 1 120271024 to 120271033 9 - TSS region transcription start site region 13249
Tssr13250 1 120271074 to 120271085 11 - TSS region transcription start site region 13250
D1Mit389 1 120284201 to 120284349 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 389
Cpgi668 1 120340159 to 120342790 2631 CpG island CpG island 668
Tssr8402 1 120340569 to 120340580 11 + TSS region transcription start site region 8402
C1ql2 1 120340582 to 120343174 2592 + protein coding gene complement component 1, q subcomponent-like 2
Tssr8403 1 120340605 to 120340645 40 + TSS region transcription start site region 8403
Tssr8404 1 120340655 to 120340664 9 + TSS region transcription start site region 8404
Tssr8405 1 120340760 to 120340769 9 + TSS region transcription start site region 8405
Gm46154 1 120427074 to 120435740 8666 - lncRNA gene predicted gene, 46154
Tssr13251 1 120435722 to 120435727 5 - TSS region transcription start site region 13251
Tssr13252 1 120435739 to 120435750 11 - TSS region transcription start site region 13252
1700012E03Rik 1 120435805 to 120438455 2650 + lincRNA gene RIKEN cDNA 1700012E03 gene
Tssr13253 1 120447477 to 120447482 5 - TSS region transcription start site region 13253
Tssr13254 1 120449674 to 120449678 4 - TSS region transcription start site region 13254
Cpgi669 1 120469096 to 120469257 161 CpG island CpG island 669
Marco 1 120474538 to 120505024 30486 - protein coding gene macrophage receptor with collagenous structure
Tssr13255 1 120476667 to 120476688 21 - TSS region transcription start site region 13255
Tssr13256 1 120476721 to 120476734 13 - TSS region transcription start site region 13256
Tssr13257 1 120477285 to 120477287 2 - TSS region transcription start site region 13257
Tssr13258 1 120477389 to 120477437 48 - TSS region transcription start site region 13258
Tssr13259 1 120479033 to 120479049 16 - TSS region transcription start site region 13259
Tssr8406 1 120479336 to 120479368 32 + TSS region transcription start site region 8406
Tssr13260 1 120483187 to 120483212 25 - TSS region transcription start site region 13260
Tssr8407 1 120484615 to 120484651 36 + TSS region transcription start site region 8407
Tssr13261 1 120484804 to 120484818 14 - TSS region transcription start site region 13261
Tssr13262 1 120484831 to 120484863 32 - TSS region transcription start site region 13262
Tssr8408 1 120485842 to 120485855 13 + TSS region transcription start site region 8408
Tssr13263 1 120485878 to 120485923 45 - TSS region transcription start site region 13263
Tssr8409 1 120485884 to 120485909 25 + TSS region transcription start site region 8409
Tssr13264 1 120488183 to 120488195 12 - TSS region transcription start site region 13264
Tssr8410 1 120488190 to 120488226 36 + TSS region transcription start site region 8410
Tssr13265 1 120488561 to 120488582 21 - TSS region transcription start site region 13265
Tssr13266 1 120490082 to 120490100 18 - TSS region transcription start site region 13266
Tssr8411 1 120490905 to 120490930 25 + TSS region transcription start site region 8411
Tssr8412 1 120492033 to 120492067 34 + TSS region transcription start site region 8412
Tssr13267 1 120494122 to 120494140 18 - TSS region transcription start site region 13267
D1Mit391 1 120494511 to 120494612 101 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 391
Tssr13268 1 120494807 to 120494818 11 - TSS region transcription start site region 13268
Tssr8413 1 120495462 to 120495468 6 + TSS region transcription start site region 8413
Tssr13269 1 120496022 to 120496046 24 - TSS region transcription start site region 13269
Tssr13270 1 120504749 to 120504768 19 - TSS region transcription start site region 13270
Tssr13271 1 120504820 to 120504833 13 - TSS region transcription start site region 13271
Tssr13272 1 120504873 to 120504878 5 - TSS region transcription start site region 13272
Tssr13273 1 120504940 to 120504952 12 - TSS region transcription start site region 13273
Tssr13274 1 120517618 to 120517626 8 - TSS region transcription start site region 13274
Tssr13275 1 120517661 to 120517669 8 - TSS region transcription start site region 13275
Tssr13276 1 120531839 to 120531863 24 - TSS region transcription start site region 13276
D1Mit226 1 120542724 to 120542859 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 226