Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:119922211-120072249

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfap221 1 119923341 to 119997234 73893 - protein coding gene cilia and flagella associated protein 221
Tssr13229 1 119936300 to 119936338 38 - TSS region transcription start site region 13229
Gm17973 1 119986797 to 119987314 517 + pseudogene predicted gene, 17973
Cpgi662 1 119997076 to 119997326 250 CpG island CpG island 662
Tssr13230 1 119997161 to 119997170 9 - TSS region transcription start site region 13230
Tssr13231 1 119997211 to 119997249 38 - TSS region transcription start site region 13231
Gm33817 1 119997707 to 119999485 1778 + lncRNA gene predicted gene, 33817
Sctr 1 120006899 to 120063539 56640 + protein coding gene secretin receptor
Tssr8393 1 120007013 to 120007028 15 + TSS region transcription start site region 8393
Tssr8394 1 120007045 to 120007059 14 + TSS region transcription start site region 8394
Tssr8395 1 120007072 to 120007083 11 + TSS region transcription start site region 8395
Cpgi663 1 120007156 to 120007667 511 CpG island CpG island 663
Cpgi664 1 120022119 to 120022274 155 CpG island CpG island 664
Gm33764 1 120026288 to 120031130 4842 - lncRNA gene predicted gene, 33764
D1Mit54 1 120040804 to 120040937 133 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 54
Lxw3 1 120040804 to 120040937 133 QTL lupus BXSB x NZW 3
Gm41936 1 120046759 to 120052737 5978 - lncRNA gene predicted gene, 41936
Tssr8396 1 120055233 to 120055236 3 + TSS region transcription start site region 8396
Tssr8397 1 120055249 to 120055259 10 + TSS region transcription start site region 8397
Tmem37 1 120067377 to 120074069 6692 - protein coding gene transmembrane protein 37
Tssr13232 1 120067952 to 120067966 14 - TSS region transcription start site region 13232