Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:119873341-120047234

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm29658	1	119874781 to 119875010	229	+	pseudogene	predicted gene 29658
Gm3551	1	119897461 to 119898124	663	+	pseudogene	predicted gene 3551
Tssr13226	1	119899853 to 119899870	17	-	TSS region	transcription start site region 13226
Gm28209	1	119903130 to 119906897	3767	+	lincRNA gene	predicted gene 28209
Tssr183	1	119906837 to 119906842	5	+	TSS region	transcription start site region 183
Tmem177	1	119907890 to 119913168	5278	-	protein coding gene	transmembrane protein 177
Cpgi661	1	119913070 to 119913436	366		CpG island	CpG island 661
Tssr13227	1	119913077 to 119913086	9	-	TSS region	transcription start site region 13227
Tssr13228	1	119913162 to 119913202	40	-	TSS region	transcription start site region 13228
D1Mit260	1	119919798 to 119919934	136		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 260
Cfap221	1	119923341 to 119997234	73893	-	protein coding gene	cilia and flagella associated protein 221
Tssr13229	1	119936300 to 119936338	38	-	TSS region	transcription start site region 13229
Gm17973	1	119986797 to 119987314	517	+	pseudogene	predicted gene, 17973
Cpgi662	1	119997076 to 119997326	250		CpG island	CpG island 662
Tssr13230	1	119997161 to 119997170	9	-	TSS region	transcription start site region 13230
Tssr13231	1	119997211 to 119997249	38	-	TSS region	transcription start site region 13231
Gm33817	1	119997707 to 119999485	1778	+	lncRNA gene	predicted gene, 33817
Sctr	1	120006899 to 120063539	56640	+	protein coding gene	secretin receptor
Tssr8393	1	120007013 to 120007028	15	+	TSS region	transcription start site region 8393
Tssr8394	1	120007045 to 120007059	14	+	TSS region	transcription start site region 8394
Tssr8395	1	120007072 to 120007083	11	+	TSS region	transcription start site region 8395
Cpgi663	1	120007156 to 120007667	511		CpG island	CpG island 663
Cpgi664	1	120022119 to 120022274	155		CpG island	CpG island 664
Gm33764	1	120026288 to 120031130	4842	-	lncRNA gene	predicted gene, 33764
Lxw3	1	120040804 to 120040937	133		QTL	lupus BXSB x NZW 3
D1Mit54	1	120040804 to 120040937	133		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 54
Gm41936	1	120046759 to 120052737	5978	-	lncRNA gene	predicted gene, 41936