Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:119642467-119847542

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epb41l5 1 119545037 to 119649000 103963 - protein coding gene erythrocyte membrane protein band 4.1 like 5
Cpgi658 1 119642496 to 119642682 186 CpG island CpG island 658
D1Mit366 1 119645481 to 119645630 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 366
Cpgi659 1 119648238 to 119649229 991 CpG island CpG island 659
Tssr8391 1 119648380 to 119648389 9 + TSS region transcription start site region 8391
Tssr13216 1 119648622 to 119648653 31 - TSS region transcription start site region 13216
Tssr13217 1 119648903 to 119648981 78 - TSS region transcription start site region 13217
Ptpn4 1 119652467 to 119837542 185075 - protein coding gene protein tyrosine phosphatase, non-receptor type 4
B230337E12Rik 1 119652468 to 119654875 2407 unclassified gene RIKEN cDNA B230337E12 gene
Gm3851 1 119787769 to 119788086 317 + pseudogene predicted gene 3851
Gm37745 1 119790763 to 119798925 8162 - unclassified gene predicted gene, 37745
Gm29657 1 119793520 to 119794229 709 + pseudogene predicted gene 29657
Gm8338 1 119817763 to 119818125 362 + pseudogene predicted gene 8338
Tssr13218 1 119821312 to 119821316 4 - TSS region transcription start site region 13218
Tssr13219 1 119828087 to 119828092 5 - TSS region transcription start site region 13219
Cpgi660 1 119836769 to 119837897 1128 CpG island CpG island 660
Tssr13220 1 119837088 to 119837139 51 - TSS region transcription start site region 13220
Tssr8392 1 119837170 to 119837177 7 + TSS region transcription start site region 8392
Tssr13221 1 119837288 to 119837299 11 - TSS region transcription start site region 13221
Tssr13222 1 119837319 to 119837328 9 - TSS region transcription start site region 13222
Tssr13223 1 119837338 to 119837386 48 - TSS region transcription start site region 13223
Tssr13224 1 119837466 to 119837555 89 - TSS region transcription start site region 13224
Tssr13225 1 119837667 to 119837673 6 - TSS region transcription start site region 13225