Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:119525037-119669000

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm27184 1 119520090 to 119526359 6269 - antisense lncRNA gene predicted gene 27184
Cpgi657 1 119525616 to 119527018 1402 CpG island CpG island 657
Tssr8389 1 119526125 to 119526180 55 + TSS region transcription start site region 8389
Tmem185b 1 119526160 to 119528983 2823 + protein coding gene transmembrane protein 185B
Tssr8390 1 119526181 to 119526197 16 + TSS region transcription start site region 8390
Tssr13213 1 119526378 to 119526406 28 - TSS region transcription start site region 13213
3830432H09Rik 1 119529480 to 119536165 6685 - lincRNA gene RIKEN cDNA 3830432H09 gene
Gm25322 1 119530211 to 119530314 103 + snRNA gene predicted gene, 25322
Epb41l5 1 119545037 to 119649000 103963 - protein coding gene erythrocyte membrane protein band 4.1 like 5
Gm37219 1 119630744 to 119631669 925 - unclassified gene predicted gene, 37219
Tssr13214 1 119631667 to 119631668 1 - TSS region transcription start site region 13214
Tssr13215 1 119637442 to 119637446 4 - TSS region transcription start site region 13215
Cpgi658 1 119642496 to 119642682 186 CpG island CpG island 658
D1Mit366 1 119645481 to 119645630 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 366
Cpgi659 1 119648238 to 119649229 991 CpG island CpG island 659
Tssr8391 1 119648380 to 119648389 9 + TSS region transcription start site region 8391
Tssr13216 1 119648622 to 119648653 31 - TSS region transcription start site region 13216
Tssr13217 1 119648903 to 119648981 78 - TSS region transcription start site region 13217
Ptpn4 1 119652467 to 119837542 185075 - protein coding gene protein tyrosine phosphatase, non-receptor type 4
B230337E12Rik 1 119652468 to 119654875 2407 unclassified gene RIKEN cDNA B230337E12 gene