Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:118661488-119161605

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tfcp2l1 1 118627945 to 118685168 57223 + protein coding gene transcription factor CP2-like 1
Tssr8380 1 118675572 to 118675596 24 + TSS region transcription start site region 8380
Tssr8381 1 118679424 to 118679436 12 + TSS region transcription start site region 8381
Gm23497 1 118681821 to 118681950 129 + snRNA gene predicted gene, 23497
Tssr8382 1 118683462 to 118683473 11 + TSS region transcription start site region 8382
Gm28467 1 118810136 to 118810453 317 + pseudogene predicted gene 28467
Gli2 1 118834132 to 119053619 219487 - protein coding gene GLI-Kruppel family member GLI2
Cpgi651 1 118837282 to 118838072 790 CpG island CpG island 651
Tssr8383 1 118852490 to 118852503 13 + TSS region transcription start site region 8383
D1Mit367 1 118911488 to 118911613 125 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 367
D1Mit368 1 118911488 to 118911605 117 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 368
Mir6346 1 118954220 to 118954300 80 + miRNA gene microRNA 6346
D1Mit189 1 118982324 to 118982471 147 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 189
Tssr13194 1 118982551 to 118982606 55 - TSS region transcription start site region 13194
Cpgi652 1 119047604 to 119048278 674 CpG island CpG island 652
Cpgi653 1 119051965 to 119054442 2477 CpG island CpG island 653
5730512F23Rik 1 119052492 to 119053233 741 unclassified gene RIKEN cDNA 5730512F23 gene
Tssr13195 1 119053348 to 119053370 22 - TSS region transcription start site region 13195
Tssr13196 1 119053372 to 119053423 51 - TSS region transcription start site region 13196
Tssr13197 1 119053521 to 119053555 34 - TSS region transcription start site region 13197
Tssr13198 1 119053572 to 119053583 11 - TSS region transcription start site region 13198
Tssr13199 1 119053620 to 119053638 18 - TSS region transcription start site region 13199
Tssr13200 1 119053692 to 119053710 18 - TSS region transcription start site region 13200
Gm26831 1 119058469 to 119059848 1379 + lincRNA gene predicted gene, 26831
Gm41934 1 119119086 to 119126904 7818 - lncRNA gene predicted gene, 41934
Gm8321 1 119157586 to 119158565 979 + pseudogene predicted gene 8321