Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:118427945-118885168

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clasp1 1 118389058 to 118609462 220404 + protein coding gene CLIP associating protein 1
Gm26080 1 118453355 to 118453485 130 - snoRNA gene predicted gene, 26080
2900060B14Rik 1 118458669 to 118459265 596 - antisense lncRNA gene RIKEN cDNA 2900060B14 gene
Gm22710 1 118459141 to 118459265 124 - snRNA gene predicted gene, 22710
Cpgi649 1 118459177 to 118459998 821 CpG island CpG island 649
Tssr13193 1 118459263 to 118459267 4 - TSS region transcription start site region 13193
Tssr8364 1 118459587 to 118459621 34 + TSS region transcription start site region 8364
Tssr8365 1 118469809 to 118469820 11 + TSS region transcription start site region 8365
Gm28466 1 118478604 to 118479591 987 - pseudogene predicted gene 28466
Tssr8366 1 118481448 to 118481457 9 + TSS region transcription start site region 8366
Tssr8367 1 118481462 to 118481477 15 + TSS region transcription start site region 8367
Tssr8368 1 118481504 to 118481515 11 + TSS region transcription start site region 8368
Tssr8369 1 118481694 to 118481716 22 + TSS region transcription start site region 8369
Tssr8370 1 118481966 to 118481979 13 + TSS region transcription start site region 8370
Tssr8371 1 118482004 to 118482024 20 + TSS region transcription start site region 8371
Tssr8372 1 118482041 to 118482063 22 + TSS region transcription start site region 8372
Tssr8373 1 118482186 to 118482194 8 + TSS region transcription start site region 8373
Tssr8374 1 118569904 to 118569908 4 + TSS region transcription start site region 8374
Tssr180 1 118590967 to 118590968 1 - TSS region transcription start site region 180
Tssr8375 1 118597272 to 118597276 4 + TSS region transcription start site region 8375
Cpgi650 1 118627718 to 118628454 736 CpG island CpG island 650
Tssr8376 1 118627943 to 118627951 8 + TSS region transcription start site region 8376
Tfcp2l1 1 118627945 to 118685168 57223 + protein coding gene transcription factor CP2-like 1
Tssr8377 1 118627986 to 118628014 28 + TSS region transcription start site region 8377
Tssr8378 1 118628045 to 118628060 15 + TSS region transcription start site region 8378
Gm22094 1 118638288 to 118638404 116 - rRNA gene predicted gene, 22094
Gm28882 1 118651482 to 118651795 313 - pseudogene predicted gene 28882
Tssr8379 1 118653751 to 118653755 4 + TSS region transcription start site region 8379
Tssr8380 1 118675572 to 118675596 24 + TSS region transcription start site region 8380
Tssr8381 1 118679424 to 118679436 12 + TSS region transcription start site region 8381
Gm23497 1 118681821 to 118681950 129 + snRNA gene predicted gene, 23497
Tssr8382 1 118683462 to 118683473 11 + TSS region transcription start site region 8382
Gm28467 1 118810136 to 118810453 317 + pseudogene predicted gene 28467
Gli2 1 118834132 to 119053619 219487 - protein coding gene GLI-Kruppel family member GLI2
Cpgi651 1 118837282 to 118838072 790 CpG island CpG island 651
Tssr8383 1 118852490 to 118852503 13 + TSS region transcription start site region 8383