Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:115659930-117500115

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17916 1 115669409 to 115670583 1174 - pseudogene predicted gene, 17916
Cpgi644 1 115684702 to 115684868 166 CpG island CpG island 644
Tssr8354 1 115684727 to 115684744 17 + TSS region transcription start site region 8354
Cntnap5a 1 115684756 to 116587323 902567 + protein coding gene contactin associated protein-like 5A
Tssr178 1 115684954 to 115684958 4 + TSS region transcription start site region 178
Tssr8355 1 115826322 to 115826327 5 + TSS region transcription start site region 8355
Tssr8356 1 115923977 to 115923983 6 + TSS region transcription start site region 8356
Tssr179 1 116182043 to 116182046 3 - TSS region transcription start site region 179
Gm23393 1 116394342 to 116394413 71 - miRNA gene predicted gene, 23393
D1Mit188 1 116579930 to 116580115 185 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 188
Pbbcp1 1 116579930 to 116580115 185 QTL peripheral blood B cell percentage 1
D1Mit340 1 116616221 to 116616406 185 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 340
Gm28263 1 116633777 to 116634176 399 + pseudogene predicted gene 28263
Gm19965 1 116802983 to 116823410 20427 + protein coding gene predicted gene, 19965
D1Mit310 1 116987606 to 116987710 104 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 310
D1Mit1014 1 117198790 to 117198902 112 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 1014
D1Mit1015 1 117198872 to 117199035 163 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1015
Led2 1 117267351 to 85768306 -31499045 QTL late embryonic death 2
Gm17777 1 117392257 to 117393532 1275 - pseudogene predicted gene, 17777