Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:111144312-112585139

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4921525D07Rik 1 111142308 to 111150236 7928 - lncRNA gene RIKEN cDNA 4921525D07 gene
Gm29088 1 111385690 to 111446645 60955 - lincRNA gene predicted gene 29088
Gm19927 1 111385918 to 111386698 780 + pseudogene predicted gene, 19927
D1Ertd507e 1 111572314 to 111572526 212 DNA segment DNA segment, Chr 1, ERATO Doi 507, expressed
Cpgi641 1 111754576 to 111754746 170 CpG island CpG island 641
Gm8173 1 111804934 to 111807775 2841 - pseudogene predicted gene 8173
Tssr8350 1 111833267 to 111833275 8 + TSS region transcription start site region 8350
Gm37934 1 111833823 to 111834224 401 + unclassified gene predicted gene, 37934
Dsel 1 111858702 to 111864918 6216 - protein coding gene dermatan sulfate epimerase-like
Cpgi642 1 111864312 to 111865139 827 CpG island CpG island 642
Tssr13184 1 111864709 to 111864722 13 - TSS region transcription start site region 13184
Tssr13185 1 111864869 to 111864929 60 - TSS region transcription start site region 13185
Tssr13186 1 111864941 to 111864952 11 - TSS region transcription start site region 13186
Gm6028 1 111880735 to 111881308 573 - pseudogene predicted gene 6028
Tssr13187 1 111881334 to 111881335 1 - TSS region transcription start site region 13187
Gm17752 1 112051069 to 112055275 4206 - pseudogene predicted gene, 17752
Tssr176 1 112059190 to 112059192 2 + TSS region transcription start site region 176
Lrnx12 1 112081092 to 168358833 56277741 QTL learning-contextual 12
Eila1 1 112081092 to 175641372 63560280 QTL ethanol induced locomotor activity 1
D1Mit26 1 112081092 to 112081285 193 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 26
Gm6717 1 112137868 to 112138705 837 + pseudogene predicted gene 6717
Gm19086 1 112151089 to 112151753 664 + pseudogene predicted gene, 19086
D1Mit492 1 112229296 to 112229418 122 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 492
Gm29691 1 112351947 to 112353317 1370 - pseudogene predicted gene, 29691
Gm32810 1 112377317 to 112417006 39689 - lncRNA gene predicted gene, 32810
Gm18506 1 112386277 to 112386978 701 + pseudogene predicted gene, 18506
Gm18406 1 112404187 to 112404855 668 - pseudogene predicted gene, 18406
Cpgi643 1 112416423 to 112417105 682 CpG island CpG island 643
Gm41931 1 112416748 to 112512148 95400 + lncRNA gene predicted gene, 41931
Tssr8351 1 112457566 to 112457578 12 + TSS region transcription start site region 8351
Gm22331 1 112467911 to 112468046 135 + snoRNA gene predicted gene, 22331