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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:108877431-111245157

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D1Mit416 1 108910467 to 108910684 217 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 416
Bmd19 1 108910684 to 73227055 -35683629 QTL bone mineral density 19
Gm17847 1 108997634 to 108998760 1126 - pseudogene predicted gene, 17847
Tssr8347 1 109122612 to 109122619 7 + TSS region transcription start site region 8347
Gm28281 1 109574943 to 109575129 186 - pseudogene predicted gene 28281
Gm22159 1 109623008 to 109623137 129 - snoRNA gene predicted gene, 22159
Gm25293 1 109804760 to 109805044 284 + unclassified non-coding RNA gene predicted gene, 25293
Gm8141 1 109833024 to 109834746 1722 + pseudogene predicted gene 8141
Synch3 1 109973712 to 109973820 108 QTL synechia 3
D1Mit493 1 109973712 to 109973820 108 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 493
Cpgi640 1 109982281 to 109983441 1160 CpG island CpG island 640
Cdh7 1 109982431 to 110140157 157726 + protein coding gene cadherin 7, type 2
Tssr8348 1 109983277 to 109983303 26 + TSS region transcription start site region 8348
Tssr175 1 109983751 to 109983762 11 + TSS region transcription start site region 175
Gm41930 1 110238621 to 110240240 1619 + lncRNA gene predicted gene, 41930
Tssr8349 1 110238622 to 110238652 30 + TSS region transcription start site region 8349
Gm18552 1 110410743 to 110411280 537 - pseudogene predicted gene, 18552
Gm3332 1 110475612 to 110476532 920 + pseudogene predicted gene 3332
Gm6693 1 110600021 to 110600833 812 + pseudogene predicted gene 6693
D1Mit308 1 110608197 to 110608345 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 308
Mord2 1 110608345 to 77146478 -33461867 QTL modifier of retinal degeneration 2
Cdh19 1 110888326 to 110977584 89258 - protein coding gene cadherin 19, type 2
n-TKctt7 1 110904747 to 110904819 72 - tRNA gene nuclear encoded tRNA lysine 7 (anticodon CTT)
Tssr13178 1 110922354 to 110922358 4 - TSS region transcription start site region 13178
Gm38255 1 110957831 to 110960826 2995 - unclassified gene predicted gene, 38255
Tssr13179 1 110959810 to 110959816 6 - TSS region transcription start site region 13179
Gm36944 1 110964679 to 110967437 2758 - unclassified gene predicted gene, 36944
Tssr13180 1 110977323 to 110977332 9 - TSS region transcription start site region 13180
Tssr13181 1 110977352 to 110977365 13 - TSS region transcription start site region 13181
Tssr13182 1 110977366 to 110977382 16 - TSS region transcription start site region 13182
Tssr13183 1 110977409 to 110977421 12 - TSS region transcription start site region 13183
4921525D07Rik 1 111142308 to 111150236 7928 - lncRNA gene RIKEN cDNA 4921525D07 gene