Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:107381970-109374438

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm15391 1 107385200 to 107387412 2212 - lincRNA gene predicted gene 15391
Tssr13176 1 107387427 to 107387429 2 - TSS region transcription start site region 13176
Tssr8330 1 107399482 to 107399488 6 + TSS region transcription start site region 8330
Tssr8331 1 107399643 to 107399665 22 + TSS region transcription start site region 8331
Tssr8332 1 107420190 to 107420197 7 + TSS region transcription start site region 8332
Tssr8333 1 107422681 to 107422695 14 + TSS region transcription start site region 8333
Serpinb7 1 107422689 to 107452689 30000 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 7
Gm24553 1 107440047 to 107440177 130 - snoRNA gene predicted gene, 24553
Tssr8334 1 107511416 to 107511431 15 + TSS region transcription start site region 8334
Serpinb2 1 107511423 to 107535478 24055 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 2
Tssr8335 1 107511433 to 107511457 24 + TSS region transcription start site region 8335
Tssr8336 1 107511463 to 107511468 5 + TSS region transcription start site region 8336
Tssr8337 1 107511489 to 107511502 13 + TSS region transcription start site region 8337
Tssr8338 1 107511527 to 107511532 5 + TSS region transcription start site region 8338
Tssr8339 1 107529003 to 107529014 11 + TSS region transcription start site region 8339
Serpinb10 1 107529003 to 107549271 20268 + polymorphic pseudogene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10
Tssr8340 1 107529018 to 107529058 40 + TSS region transcription start site region 8340
Gm18249 1 107558899 to 107560673 1774 - pseudogene predicted gene, 18249
D1Mit417 1 107565868 to 107565982 114 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 417
Tssr8341 1 107589957 to 107589978 21 + TSS region transcription start site region 8341
Tssr8342 1 107589997 to 107590040 43 + TSS region transcription start site region 8342
Serpinb8 1 107590006 to 107610484 20478 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 8
Tssr8343 1 107590058 to 107590113 55 + TSS region transcription start site region 8343
D1Mit388 1 107606359 to 107606500 141 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 388
D1Mit258 1 107646551 to 107646697 146 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 258
Gm15389 1 107687008 to 107693514 6506 + lincRNA gene predicted gene 15389
Gm24267 1 107756602 to 107756708 106 - snRNA gene predicted gene, 24267
Gm22438 1 107892974 to 107893105 131 + snoRNA gene predicted gene, 22438
Tssr8344 1 107917254 to 107917263 9 + TSS region transcription start site region 8344
D830032E09Rik 1 107917259 to 107950947 33688 + lincRNA gene RIKEN cDNA D830032E09 gene
Tssr8345 1 107917279 to 107917302 23 + TSS region transcription start site region 8345
Gm18448 1 107952837 to 107953435 598 + pseudogene predicted gene, 18448
Gm28282 1 107963122 to 107963307 185 - pseudogene predicted gene 28282
Gm41929 1 107972316 to 107978949 6633 + lncRNA gene predicted gene, 41929
Tssr8346 1 108373105 to 108373111 6 + TSS region transcription start site region 8346
Gm5702 1 108376970 to 108379438 2468 - pseudogene predicted gene 5702
Gm38212 1 108417077 to 108419832 2755 + unclassified gene predicted gene, 38212
Tssr13177 1 108440462 to 108440465 3 - TSS region transcription start site region 13177
Gm28283 1 108612337 to 108612514 177 - pseudogene predicted gene 28283
Gm6679 1 108770135 to 108772003 1868 + pseudogene predicted gene 6679
D1Mit416 1 108910467 to 108910684 217 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 416
Bmd19 1 108910684 to 73227055 -35683629 QTL bone mineral density 19
Gm17847 1 108997634 to 108998760 1126 - pseudogene predicted gene, 17847
Tssr8347 1 109122612 to 109122619 7 + TSS region transcription start site region 8347