Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:106438178-106814274

47 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr174	1	106439506 to 106439518	12	+	TSS region	transcription start site region 174
Gm6651	1	106439600 to 106439870	270	+	pseudogene	predicted gene 6651
Tssr13143	1	106515528 to 106515543	15	-	TSS region	transcription start site region 13143
Tssr8316	1	106518118 to 106518129	11	+	TSS region	transcription start site region 8316
Gm41928	1	106520131 to 106529442	9311	+	lncRNA gene	predicted gene, 41928
Bcl2	1	106538178 to 106714274	176096	-	protein coding gene	B cell leukemia/lymphoma 2
Lrncs1	1	106538178 to 106714274	176096		QTL	learning-conditioned stimulus 1
Tssr8317	1	106541938 to 106541976	38	+	TSS region	transcription start site region 8317
D630008O14Rik	1	106541943 to 106575045	33102	+	antisense lncRNA gene	RIKEN cDNA D630008O14 gene
D1Mit515	1	106543050 to 106543273	223		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-515
Tssr13144	1	106543295 to 106543306	11	-	TSS region	transcription start site region 13144
Mir3473f	1	106546496 to 106546631	135	-	miRNA gene	microRNA 3473f
D1Mit163	1	106584134 to 106584260	126		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 163
Tssr13145	1	106594439 to 106594453	14	-	TSS region	transcription start site region 13145
Gm37053	1	106604784 to 106606870	2086	-	lncRNA gene	predicted gene, 37053
Tssr13146	1	106606791 to 106606794	3	-	TSS region	transcription start site region 13146
Tssr13147	1	106608519 to 106608523	4	-	TSS region	transcription start site region 13147
Tssr13148	1	106642213 to 106642216	3	-	TSS region	transcription start site region 13148
Tssr13149	1	106642264 to 106642275	11	-	TSS region	transcription start site region 13149
Tssr13150	1	106664269 to 106664273	4	-	TSS region	transcription start site region 13150
Tssr13151	1	106695711 to 106695725	14	-	TSS region	transcription start site region 13151
Tssr13152	1	106705519 to 106705523	4	-	TSS region	transcription start site region 13152
Tssr13153	1	106705832 to 106705835	3	-	TSS region	transcription start site region 13153
Tssr13154	1	106711575 to 106711588	13	-	TSS region	transcription start site region 13154
Tssr13155	1	106711598 to 106711609	11	-	TSS region	transcription start site region 13155
Cpgi636	1	106712342 to 106712940	598		CpG island	CpG island 636
Tssr13156	1	106712359 to 106712384	25	-	TSS region	transcription start site region 13156
Tssr13157	1	106712388 to 106712428	40	-	TSS region	transcription start site region 13157
Tssr13158	1	106712429 to 106712456	27	-	TSS region	transcription start site region 13158
Tssr8318	1	106712546 to 106712557	11	+	TSS region	transcription start site region 8318
Cpgi637	1	106713597 to 106714914	1317		CpG island	CpG island 637
Tssr13159	1	106713915 to 106713924	9	-	TSS region	transcription start site region 13159
Tssr13160	1	106713962 to 106714049	87	-	TSS region	transcription start site region 13160
Tssr13161	1	106714217 to 106714330	113	-	TSS region	transcription start site region 13161
Kdsr	1	106720459 to 106759727	39268	-	protein coding gene	3-ketodihydrosphingosine reductase
Tssr13162	1	106724481 to 106724484	3	-	TSS region	transcription start site region 13162
Tssr13163	1	106744373 to 106744381	8	-	TSS region	transcription start site region 13163
Cpgi638	1	106759207 to 106760124	917		CpG island	CpG island 638
Tssr13164	1	106759651 to 106759658	7	-	TSS region	transcription start site region 13164
Tssr13165	1	106759660 to 106759688	28	-	TSS region	transcription start site region 13165
Tssr13166	1	106759693 to 106759725	32	-	TSS region	transcription start site region 13166
Tssr13167	1	106759727 to 106759748	21	-	TSS region	transcription start site region 13167
Tssr13168	1	106768979 to 106768984	5	-	TSS region	transcription start site region 13168
Vps4b	1	106770788 to 106796725	25937	-	protein coding gene	vacuolar protein sorting 4B
Cpgi639	1	106796130 to 106796894	764		CpG island	CpG island 639
Tssr13169	1	106796609 to 106796669	60	-	TSS region	transcription start site region 13169
Tssr13170	1	106796687 to 106796713	26	-	TSS region	transcription start site region 13170