Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:105990068-106191015

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7160 1 105979350 to 105990282 10932 - lincRNA gene predicted gene 7160
Cpgi633 1 105989716 to 105992051 2335 CpG island CpG island 633
Tssr13138 1 105990064 to 105990089 25 - TSS region transcription start site region 13138
Tssr13139 1 105990093 to 105990113 20 - TSS region transcription start site region 13139
Tssr8280 1 105990188 to 105990209 21 + TSS region transcription start site region 8280
Tssr13140 1 105990225 to 105990238 13 - TSS region transcription start site region 13140
Tssr13141 1 105990243 to 105990275 32 - TSS region transcription start site region 13141
Tssr13142 1 105990277 to 105990296 19 - TSS region transcription start site region 13142
Tssr8281 1 105990384 to 105990498 114 + TSS region transcription start site region 8281
Zcchc2 1 105990406 to 106034074 43668 + protein coding gene zinc finger, CCHC domain containing 2
Tssr8282 1 105990652 to 105990718 66 + TSS region transcription start site region 8282
Tssr172 1 105990721 to 105990750 29 + TSS region transcription start site region 172
Tssr8283 1 105990752 to 105990772 20 + TSS region transcription start site region 8283
Tssr8284 1 105990776 to 105990813 37 + TSS region transcription start site region 8284
Tssr173 1 105990817 to 105990831 14 + TSS region transcription start site region 173
Tssr8285 1 105990973 to 105990999 26 + TSS region transcription start site region 8285
Tssr8286 1 105991515 to 105991569 54 + TSS region transcription start site region 8286
Cpgi634 1 105993490 to 105994120 630 CpG island CpG island 634
Tssr8287 1 105993961 to 105993983 22 + TSS region transcription start site region 8287
Tssr8288 1 106002843 to 106002848 5 + TSS region transcription start site region 8288
Tssr8289 1 106022137 to 106022146 9 + TSS region transcription start site region 8289
Tssr8290 1 106026379 to 106026382 3 + TSS region transcription start site region 8290
Tssr8291 1 106033647 to 106033691 44 + TSS region transcription start site region 8291
Gm37372 1 106072584 to 106075894 3310 - unclassified gene predicted gene, 37372
Gm26509 1 106090068 to 106091015 947 + pseudogene predicted gene, 26509
Gm20753 1 106152625 to 106171524 18899 - lincRNA gene predicted gene, 20753
Cpgi635 1 106171357 to 106173530 2173 CpG island CpG island 635
Tssr8292 1 106171650 to 106171729 79 + TSS region transcription start site region 8292
Tssr8293 1 106171773 to 106171879 106 + TSS region transcription start site region 8293
Phlpp1 1 106171869 to 106394245 222376 + protein coding gene PH domain and leucine rich repeat protein phosphatase 1
Tssr8294 1 106171882 to 106171896 14 + TSS region transcription start site region 8294
Tssr8295 1 106171897 to 106171911 14 + TSS region transcription start site region 8295
Tssr8296 1 106178534 to 106178548 14 + TSS region transcription start site region 8296