Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:105559194-105969450

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pign 1 105518422 to 105663677 145255 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class N
Gm28404 1 105564126 to 105564578 452 - sense intronic lncRNA gene predicted gene 28404
Gm20302 1 105574537 to 105574811 274 + pseudogene predicted gene, 20302
Gm22426 1 105574687 to 105574782 95 + miRNA gene predicted gene, 22426
Gm8004 1 105615742 to 105616358 616 + pseudogene predicted gene 8004
Cpgi627 1 105663256 to 105664830 1574 CpG island CpG island 627
Tssr13131 1 105663641 to 105663660 19 - TSS region transcription start site region 13131
Tssr13132 1 105663665 to 105663680 15 - TSS region transcription start site region 13132
Relch 1 105663841 to 105755131 91290 + protein coding gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing
Tssr8261 1 105663855 to 105663866 11 + TSS region transcription start site region 8261
Tssr8262 1 105663869 to 105663920 51 + TSS region transcription start site region 8262
Tssr8263 1 105669330 to 105669338 8 + TSS region transcription start site region 8263
Tssr8264 1 105669809 to 105669812 3 + TSS region transcription start site region 8264
Tssr8265 1 105675650 to 105675654 4 + TSS region transcription start site region 8265
Tssr8266 1 105678173 to 105678177 4 + TSS region transcription start site region 8266
Tssr8267 1 105701404 to 105701408 4 + TSS region transcription start site region 8267
Gm37566 1 105708573 to 105712927 4354 + unclassified gene predicted gene, 37566
Cpgi628 1 105764194 to 105764450 256 CpG island CpG island 628
Gm10193 1 105764444 to 105764674 230 + pseudogene predicted gene 10193
Cpgi629 1 105780145 to 105781288 1143 CpG island CpG island 629
Tssr8268 1 105780693 to 105780762 69 + TSS region transcription start site region 8268
Tnfrsf11a 1 105780723 to 105847981 67258 + protein coding gene tumor necrosis factor receptor superfamily, member 11a, NFKB activator
Tssr8269 1 105788070 to 105788076 6 + TSS region transcription start site region 8269
Cpgi630 1 105813590 to 105813880 290 CpG island CpG island 630
Cpgi631 1 105844505 to 105844986 481 CpG island CpG island 631
Tssr8270 1 105845043 to 105845062 19 + TSS region transcription start site region 8270
Tssr8271 1 105845253 to 105845264 11 + TSS region transcription start site region 8271
Tssr8272 1 105846704 to 105846719 15 + TSS region transcription start site region 8272
Tssr8273 1 105846934 to 105846946 12 + TSS region transcription start site region 8273
Tssr8274 1 105847005 to 105847023 18 + TSS region transcription start site region 8274
Gm41926 1 105863846 to 105877496 13650 + lncRNA gene predicted gene, 41926
Tssr13133 1 105880863 to 105880868 5 - TSS region transcription start site region 13133
Cpgi632 1 105881069 to 105881280 211 CpG island CpG island 632
Gm37779 1 105887633 to 105891012 3379 - unclassified gene predicted gene, 37779
Gm41927 1 105903629 to 105934291 30662 - lncRNA gene predicted gene, 41927
Gm26214 1 105945554 to 105945660 106 + snRNA gene predicted gene, 26214
Gm18801 1 105955775 to 105956310 535 - pseudogene predicted gene, 18801
Tssr13134 1 105967036 to 105967082 46 - TSS region transcription start site region 13134
Tssr13135 1 105967714 to 105967786 72 - TSS region transcription start site region 13135