Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:100983415-104923548

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr8245 1 101155763 to 101155782 19 + TSS region transcription start site region 8245
Tssr8246 1 101155788 to 101155804 16 + TSS region transcription start site region 8246
Gm20268 1 101155809 to 101175202 19393 + lincRNA gene predicted gene, 20268
Tssr8247 1 101231851 to 101231856 5 + TSS region transcription start site region 8247
Gm31973 1 101262730 to 101280206 17476 + lncRNA gene predicted gene, 31973
Tssr8248 1 101302414 to 101302426 12 + TSS region transcription start site region 8248
Gm28801 1 101371628 to 101372076 448 + pseudogene predicted gene 28801
Psmb6-ps2 1 101385886 to 101386590 704 + pseudogene proteasome (prosome, macropain) subunit, beta type 6, pseudogene 2
Tssr8249 1 101487662 to 101487663 1 + TSS region transcription start site region 8249
Tssr170 1 101608391 to 101608397 6 + TSS region transcription start site region 170
D1Dcr43 1 101662986 to 101663086 100 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 43
D1Ertd62e 1 101752513 to 101752742 229 unclassified gene DNA segment, Chr 1, ERATO Doi 62, expressed
Gm18969 1 101753814 to 101754543 729 - pseudogene predicted gene, 18969
Gm28188 1 101880506 to 101880741 235 - pseudogene predicted gene 28188
Gm28187 1 101892958 to 101895091 2133 - lincRNA gene predicted gene 28187
Tssr13119 1 101895862 to 101895909 47 - TSS region transcription start site region 13119
D1Dcr44 1 101912004 to 101912102 98 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 44
D1Mit136 1 101998150 to 101998252 102 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 136
Gm24122 1 102106449 to 102106580 131 - snoRNA gene predicted gene, 24122
Gm28623 1 102161367 to 102161939 572 + pseudogene predicted gene 28623
Tssr13120 1 102189077 to 102189084 7 - TSS region transcription start site region 13120
Gm23036 1 102413923 to 102414021 98 - snoRNA gene predicted gene, 23036
Gm3116 1 102449353 to 102537656 88303 + pseudogene predicted gene 3116
Gm20281 1 102458656 to 102458922 266 - pseudogene predicted gene, 20281
D1Mit86 1 102581465 to 102581623 158 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 86
Tssr13121 1 102628196 to 102628234 38 - TSS region transcription start site region 13121
Tssr13122 1 102628264 to 102628293 29 - TSS region transcription start site region 13122
Gm22034 1 102953415 to 102953548 133 - snoRNA gene predicted gene, 22034
Gm18728 1 103171926 to 103268593 96667 + pseudogene predicted gene, 18728
D1Mit467 1 103196704 to 103196839 135 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-467
Gm23965 1 103236626 to 103236767 141 - snoRNA gene predicted gene, 23965
Ecgnq1 1 103350337 to 120607496 17257159 QTL eccrine gland number QTL 1
Gm29141 1 103363986 to 103423658 59672 + pseudogene predicted gene 29141
Aath1 1 103556204 to 103556204 0 QTL aortic arch atherosclerosis 1
Gm37789 1 103724345 to 103727233 2888 + unclassified gene predicted gene, 37789
D1Mit468 1 104005680 to 104005815 135 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-468
Nobq3 1 104005680 to 191493284 87487604 QTL New Zealand obese QTL 3
D1Mit490 1 104069240 to 104069360 120 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 490
Gm41924 1 104304699 to 104322994 18295 - lncRNA gene predicted gene, 41924
Gm18447 1 104311721 to 104312027 306 + pseudogene predicted gene, 18447
Gm29140 1 104470941 to 104471416 475 - pseudogene predicted gene 29140
Gm23537 1 104485957 to 104486286 329 + unclassified non-coding RNA gene predicted gene, 23537
Gm5260 1 104513001 to 104513766 765 + pseudogene predicted gene 5260
Gm29592 1 104609524 to 104610883 1359 + pseudogene predicted gene 29592
Gm29011 1 104632584 to 104633358 774 - pseudogene predicted gene 29011
Cpgi622 1 104768430 to 104769452 1022 CpG island CpG island 622
Tssr8250 1 104768510 to 104768526 16 + TSS region transcription start site region 8250
Tssr8251 1 104768596 to 104768608 12 + TSS region transcription start site region 8251
Tssr8252 1 104768796 to 104768823 27 + TSS region transcription start site region 8252
Cdh20 1 104768819 to 104995481 226662 + protein coding gene cadherin 20
Gm38031 1 104776114 to 104779128 3014 + unclassified gene predicted gene, 38031
Tssr8253 1 104780923 to 104780926 3 + TSS region transcription start site region 8253
n-R5s216 1 104880924 to 104881035 111 - rRNA gene nuclear encoded rRNA 5S 216
Gm36969 1 104906523 to 104909331 2808 + unclassified gene predicted gene, 36969
Gm15699 1 104911431 to 104912333 902 - antisense lncRNA gene predicted gene 15699