MPD: JaxKOMP-LAP measure: CHr

JaxKOMP-LAP phenotype measure: CHr

MPD and LIMS short name	CHr mean_corpuscular_hemoglobin_chg
Phenotype description	mean corpuscular hemoglobin (CHr) [pg]
MPD and LIMS phenotype procedure	complete blood count hematology View protocol
MPD measure ID, data type	101301 numeric data
Number of genotypes	99 genotypes completed with analytics available, both sexes
Age at testing	75-81wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

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Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

1700001O22Rik^em1(IMPC)J -/-	-0.051934	0.25242	-0.20189	0.919	0.856
Abhd17b^em1(IMPC)J -/-	0.17907	0.25629	0.84162	0.801	0.498
Acadsb^em1(IMPC)J -/-	-0.039181	0.14629	-0.12566	0.919	0.792
Acy1^em1(IMPC)J -/-	0.069082	0.25757	0.20189	0.919	0.793
Adad2^em1(IMPC)J -/-	0.015818	0.14931	0.0	0.935	0.917
Adamts14^em1(IMPC)J -/-	-0.15131	0.18609	-0.58284	0.801	0.502
Adamtsl4^em1(IMPC)J -/-	-0.79459	0.24595	-2.3263	0.0793	0.00523
Afmid^em1Llp -/-	-0.17548	0.19913	-0.70630	0.801	0.390
Agbl1^em1(IMPC)J/Mmjax -/-	0.13295	0.20118	0.52440	0.808	0.522
Ano8^em1(IMPC)J -/-	0.064407	0.16455	0.17637	0.894	0.701
Apmap^em1(IMPC)J/Mmjax -/-	0.12948	0.15995	0.49585	0.801	0.428
Arap3^em1(IMPC)J -/-	0.14048	0.12954	0.55338	0.728	0.294
AU040320^em1(IMPC)J -/-	0.34954	0.23617	1.2816	0.495	0.160
Brip1^em1(IMPC)J/Mmjax -/-	0.20802	0.20081	0.99446	0.752	0.319
Catsperz^{tm1.1(KOMP)Vlcg} -/-	0.15937	0.25992	0.67449	0.819	0.546
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-0.45962	0.13870	-1.5548	0.0782	0.00316
Cdc42bpb^em1(IMPC)J -/+	0.49029	0.21535	1.6449	0.289	0.0379
Cep135^em1(IMPC)J -/+	-0.14567	0.25279	-0.49585	0.868	0.605
Cgref1^em1(IMPC)J/Mmjax -/-	-0.33781	0.18546	-1.3408	0.402	0.0843
Cldn13^em1(IMPC)J -/-	0.16280	0.23294	0.70630	0.801	0.495
Clptm1l^em1(IMPC)J/Mmjax -/-	0.087672	0.20028	0.33185	0.891	0.668
Cr2^em1Llp -/-	0.10814	0.13320	0.38532	0.801	0.429
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	0.012069	0.40522	-0.050154	0.977	0.977
Dnajb2^em1(IMPC)J -/-	-0.41218	0.17870	-1.4758	0.289	0.0369
Dnase1l2^em1(IMPC)J -/-	0.078494	0.18683	0.27932	0.891	0.678
Dusp18^em1(IMPC)J/Mmjax -/-	-0.16789	0.15851	-0.64335	0.801	0.367
Egfem1^em1(IMPC)J -/-	-0.11088	0.30384	-0.35846	0.915	0.750
Fkbp6^{tm1b(KOMP)Wtsi} -/-	0.047341	0.20926	0.12566	0.919	0.824
Frmpd1^em1(IMPC)J -/-	-0.25960	0.24632	-1.0803	0.801	0.402
Gm20498^em1(IMPC)J/Mmjax -/-	0.15294	0.11943	0.61281	0.583	0.219
Gpr15^em1(IMPC)J -/-	0.15665	0.12183	0.64335	0.583	0.217
Gramd1c^{tm1b(KOMP)Wtsi} -/-	0.070490	0.19832	0.22754	0.911	0.727
Gramd3^em1(IMPC)J/Mmjax -/-	0.32592	0.19693	1.3408	0.402	0.113
Gsto1^em1(IMPC)J/Mmjax -/-	-0.039662	0.21075	-0.15097	0.919	0.882
Gtpbp10^{tm1b(KOMP)Mbp} -/-	0.19305	0.23184	0.91537	0.801	0.416
Hipk4^{tm1b(KOMP)Mbp} -/-	-0.050586	0.25825	-0.17637	0.919	0.847
Igsf11^{tm1b(KOMP)Wtsi} -/-	-0.34135	0.10932	-1.4051	0.0793	0.00561
Kcnc3^em1(IMPC)J -/-	-0.11674	0.24375	-0.38532	0.891	0.679
Klhl22^em1(IMPC)J/Mmjax -/-	-0.25034	0.19608	-1.0364	0.583	0.218
Krt80^em1(IMPC)J -/-	0.29557	0.14646	1.1750	0.364	0.0607
Kynu^em1(IMPC)J/Mmjax -/-	0.11033	0.13192	0.41246	0.801	0.464
Lpgat1^em1(IMPC)J/Mmjax -/-	0.083784	0.21693	0.30548	0.894	0.704
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	-0.21295	0.12037	-0.87790	0.402	0.0948
Mfsd4b4^em1(IMPC)J/Mmjax -/-	0.044573	0.27855	0.075270	0.919	0.874
Mlx^{tm1.1(KOMP)Vlcg} -/-	-0.20409	0.14015	-0.80642	0.495	0.160
Mmaa^em1(IMPC)J/Mmjax -/-	1.3517	0.74145	2.3263	0.402	0.102
Nt5dc1^em1(IMPC)J -/-	0.35890	0.21254	1.4051	0.406	0.111
Nt5dc2^em1(IMPC)J/Mmjax -/-	-0.23535	0.18683	-0.95417	0.583	0.224
Otogl^em1(IMPC)J -/-	0.012615	0.14845	-0.025069	0.943	0.933
Ovch2^{tm1b(KOMP)Mbp} -/-	0.14628	0.16067	0.58284	0.801	0.377
Pacrg^em1(IMPC)J -/-	-0.055319	0.27127	-0.22754	0.919	0.842
Patj^em1(IMPC)J -/-	0.42931	0.21150	1.4758	0.364	0.0698
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	-0.31881	0.16404	-1.2816	0.364	0.0687
Plod2^em1(IMPC)J/Mmjax -/+	0.23239	0.15089	1.0364	0.474	0.143
Ptprk^em1(IMPC)J/Mmjax -/-	0.092889	0.14713	0.35846	0.819	0.538
Pus1^em1(IMPC)J/Mmjax -/-	0.16585	0.29474	0.73885	0.845	0.581
Rab34^{tm1b(EUCOMM)Hmgu} -/+	-0.14957	0.19044	-0.52440	0.801	0.444
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.22398	0.17547	-0.91537	0.583	0.220
Rbpms2^em1(IMPC)J -/-	-0.070543	0.43209	-0.30548	0.919	0.875
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	-0.057112	0.12238	-0.25335	0.891	0.646
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.064829	0.19308	-0.27932	0.915	0.744
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-0.12941	0.18594	-0.43991	0.801	0.495
Rnf10^em1(IMPC)J -/-	-0.27451	0.083292	-1.1750	0.267	0.0216
Rtl10^em1(IMPC)J/Mmjax -/-	-0.036170	0.23627	-0.10043	0.919	0.880
Rxylt1^em1(IMPC)J/Mmjax -/+	0.18617	0.30683	0.87790	0.819	0.554
Sebox^em1(IMPC)J -/-	-0.17526	0.24413	-0.67449	0.801	0.484
Secisbp2l^em1(IMPC)J/Mmjax -/-	-0.70219	0.17650	-2.0537	0.0366	0.000740
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.28519	0.18010	-1.2265	0.470	0.133
Sh3rf3^em1(IMPC)J/Mmjax -/-	-0.27445	0.15124	-1.1264	0.402	0.0873
Slc41a2^em1(IMPC)J/Mmjax -/-	-0.083757	0.16477	-0.33185	0.875	0.619
Snx3^{tm1.1(KOMP)Vlcg} -/+	0.17333	0.13701	0.77219	0.583	0.220
Sp5^{tm1b(KOMP)Wtsi} -/-	-0.13731	0.17661	-0.46770	0.801	0.451
Spag17^{tm1b(KOMP)Wtsi} -/-	-0.019344	0.18046	-0.075270	0.935	0.916
Spink12^em1(IMPC)J -/-	0.46393	0.14866	1.5548	0.0793	0.00465
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	0.033439	0.17448	0.025069	0.919	0.850
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-0.24948	0.12579	-0.99446	0.364	0.0605
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-0.18917	0.23106	-0.77219	0.801	0.422
Taco1^em1(IMPC)J/Mmjax -/+	-0.15000	0.33718	-0.55338	0.891	0.672
Taco1^em1(IMPC)J/Mmjax -/-	0.22771	0.21970	1.0803	0.402	0.309
Tat^em1(IMPC)J/Mmjax -/-	0.71780	0.29129	1.7507	0.280	0.0254
Tbc1d5^em1(IMPC)J -/-	0.34321	0.16373	1.2265	0.364	0.0600
Tecpr2^em1(IMPC)J/Mmjax -/-	-0.48172	0.27943	-1.6449	0.406	0.110
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	0.047299	0.15055	0.10043	0.915	0.758
Thsd7a^{tm1b(KOMP)Mbp} -/-	0.038787	0.15283	0.050154	0.919	0.803
Tnnc1^em1(IMPC)J/Mmjax -/+	0.20312	0.19244	0.95417	0.737	0.305
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	0.077901	0.18861	0.25335	0.891	0.684
Trf^em1(IMPC)J/Mmjax -/+	0.82812	0.22849	2.0537	0.0782	0.00308
Trip13^{tm1.1(KOMP)Vlcg} -/-	0.088173	0.17954	0.46770	0.801	0.629
Tspan13^em1Llp -/-	-0.18316	0.20146	-0.73885	0.801	0.377
Ttc38^em1Llp -/-	0.27786	0.16868	1.1264	0.474	0.144
Tuba8^em1(IMPC)J -/-	0.78342	0.33577	1.8808	0.289	0.0351
Ubap2^em1(IMPC)J/Mmjax -/-	0.17716	0.26663	0.80642	0.808	0.515
Wdr81^em1(IMPC)J -/+	-0.52098	0.24527	-1.7507	0.364	0.0626
Yeats2^em1(IMPC)J/Mmjax -/+	0.15709	0.20239	0.15097	0.919	0.447
Zc3h7a^em1(IMPC)J/Mmjax -/-	-0.69169	0.16747	-1.8808	0.0366	0.000519
Zfp174^em1(IMPC)J -/-	0.12791	0.15374	0.43991	0.801	0.416
Zfp329^em1(IMPC)J -/-	-0.12205	0.15141	-0.41246	0.801	0.430
Zfp422^em1(IMPC)J -/-	-0.20873	0.089864	-0.84162	0.289	0.0309
Zfp706^em1(IMPC)J/Mmjax -/+	-0.16091	0.14313	-0.61281	0.707	0.279

TRAIT CORRELATION PLOT

Correlate mean corpuscular hemoglobin (CHr) with JaxKOMP-LAP trait: