MPD: JaxKOMP-LAP measure: MCV

JaxKOMP-LAP phenotype measure: MCV

MPD and LIMS short name	MCV mean_cell_volume_mcv
Phenotype description	mean RBC corpuscular volume (MCV) [fL]
MPD and LIMS phenotype procedure	complete blood count hematology View protocol
MPD measure ID, data type	101285 numeric data
Number of genotypes	100 genotypes completed with analytics available, both sexes
Age at testing	75-81wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

1700001O22Rik^em1(IMPC)J -/-	1.5027	0.60494	1.3463	0.419	0.131
Abhd17b^em1(IMPC)J -/-	0.20458	0.80234	0.34157	0.903	0.803
Acadsb^em1(IMPC)J -/-	-0.42305	0.45400	-0.42167	0.641	0.365
Acy1^em1(IMPC)J -/-	0.22622	0.54795	0.36800	0.858	0.686
Adad2^em1(IMPC)J -/-	-0.26976	0.35673	-0.23800	0.749	0.457
Adamts14^em1(IMPC)J -/-	0.19646	0.35320	0.31538	0.858	0.634
Adamtsl4^em1(IMPC)J -/-	-1.5416	0.92046	-1.6497	0.391	0.113
Afmid^em1Llp -/-	0.34593	0.46209	0.53296	0.749	0.464
Agbl1^em1(IMPC)J/Mmjax -/-	-0.26364	0.57973	-0.21254	0.858	0.655
Ano8^em1(IMPC)J -/-	0.37119	0.48944	0.56179	0.749	0.459
Apmap^em1(IMPC)J/Mmjax -/-	-0.044527	0.46237	0.062085	0.963	0.924
Arap3^em1(IMPC)J -/-	-0.20813	0.49394	-0.13693	0.858	0.679
AU040320^em1(IMPC)J -/-	2.2869	1.2099	2.0579	0.363	0.0796
Brip1^em1(IMPC)J/Mmjax -/-	1.0953	0.60237	1.0010	0.363	0.0921
Catsperz^{tm1.1(KOMP)Vlcg} -/-	-0.39117	0.90905	-0.31538	0.858	0.671
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-1.3365	0.42762	-1.4104	0.0985	0.00492
Cdc42bpb^em1(IMPC)J -/+	0.69369	0.66471	0.71397	0.626	0.312
Cgref1^em1(IMPC)J/Mmjax -/-	-0.54942	0.70196	-0.56179	0.749	0.443
Cldn13^em1(IMPC)J -/-	0.91242	0.70475	0.92218	0.508	0.215
Clptm1l^em1(IMPC)J/Mmjax -/-	1.1765	0.49523	1.0428	0.306	0.0313
Cr2^em1Llp -/-	0.58575	0.41929	0.68230	0.465	0.181
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	0.76897	1.1394	0.81366	0.777	0.509
Dnajb2^em1(IMPC)J -/-	-1.0352	0.56116	-1.2323	0.363	0.0849
Dnase1l2^em1(IMPC)J -/-	0.11429	0.61973	0.23800	0.930	0.855
Dusp18^em1(IMPC)J/Mmjax -/-	-0.47604	0.44333	-0.50457	0.641	0.362
Egfem1^em1(IMPC)J -/-	-0.54787	1.9250	-0.53296	0.903	0.803
Fbxo10^em1(IMPC)J/Mmjax -/-	-0.29960	0.52940	-0.28940	0.817	0.580
Fkbp6^{tm1b(KOMP)Wtsi} -/-	-0.40211	0.36051	-0.36800	0.591	0.278
Frmpd1^em1(IMPC)J -/-	-0.16415	0.93444	-0.037236	0.932	0.877
Gm20498^em1(IMPC)J/Mmjax -/-	0.55188	0.25309	0.62092	0.339	0.0456
Gpr15^em1(IMPC)J -/-	-0.25462	0.41071	-0.18722	0.811	0.544
Gramd1c^{tm1b(KOMP)Wtsi} -/-	0.26971	0.67550	0.39469	0.858	0.695
Gramd3^em1(IMPC)J/Mmjax -/-	1.4338	0.71932	1.2323	0.339	0.0588
Gsto1^em1(IMPC)J/Mmjax -/-	-0.66177	0.33326	-0.74637	0.619	0.297
Gtpbp10^{tm1b(KOMP)Mbp} -/-	2.0615	1.2200	1.6497	0.387	0.108
Hipk4^{tm1b(KOMP)Mbp} -/-	-0.16034	0.80036	0.012409	0.927	0.844
Igsf11^{tm1b(KOMP)Wtsi} -/-	-1.0177	0.59353	-1.1809	0.380	0.103
Kcnc3^em1(IMPC)J -/-	0.019411	1.3189	0.13693	0.990	0.990
Klhl22^em1(IMPC)J/Mmjax -/-	-0.84503	0.54309	-0.88485	0.419	0.137
Krt80^em1(IMPC)J -/-	0.71227	0.47330	0.74637	0.434	0.152
Kynu^em1(IMPC)J/Mmjax -/-	-0.16513	0.41955	-0.086973	0.878	0.720
Lpgat1^em1(IMPC)J/Mmjax -/-	0.87027	0.67961	0.88485	0.508	0.219
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	0.27234	0.62832	0.42167	0.858	0.671
Mfsd4b4^em1(IMPC)J/Mmjax -/-	0.096369	0.64142	0.18722	0.932	0.882
Mlx^{tm1.1(KOMP)Vlcg} -/-	-0.87259	0.41554	-1.0010	0.339	0.0480
Mmaa^em1(IMPC)J/Mmjax -/-	2.6578	0.69573	2.3301	0.0843	0.00337
Nars2^em1(IMPC)J -/+	1.5040	0.34204	1.4104	0.419	0.142
Nt5dc1^em1(IMPC)J -/-	1.3540	1.1081	1.1809	0.532	0.239
Nt5dc2^em1(IMPC)J/Mmjax -/-	-0.44946	0.77445	-0.47658	0.817	0.569
Otogl^em1(IMPC)J -/-	-0.0065514	0.52933	0.11191	0.990	0.990
Ovch2^{tm1b(KOMP)Mbp} -/-	1.0005	0.70034	0.96084	0.465	0.174
Pacrg^em1(IMPC)J -/-	-0.62979	1.4231	-0.68230	0.858	0.665
Patj^em1(IMPC)J -/-	1.6903	0.63739	1.5598	0.269	0.0242
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	-0.43020	0.50008	-0.77957	0.472	0.402
Plod2^em1(IMPC)J/Mmjax -/+	-0.57535	0.56910	-0.62092	0.626	0.327
Ptprk^em1(IMPC)J/Mmjax -/-	1.4906	0.82051	1.2872	0.363	0.0943
Pus1^em1(IMPC)J/Mmjax -/-	0.58049	0.56222	0.65130	0.626	0.316
Rab34^{tm1b(EUCOMM)Hmgu} -/+	-0.43130	0.55052	-0.44895	0.749	0.446
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.85839	0.47397	-0.92218	0.363	0.0889
Rbpms2^em1(IMPC)J -/-	0.29202	1.0015	0.47658	0.903	0.779
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	-0.93934	0.47315	-1.1325	0.339	0.0610
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.16479	0.64700	-0.062085	0.903	0.804
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-0.64412	0.52530	-0.71397	0.532	0.235
Rnf10^em1(IMPC)J -/-	-2.4162	0.78027	-2.3301	0.104	0.00622
Rtl10^em1(IMPC)J/Mmjax -/-	0.15805	0.58473	0.26361	0.903	0.791
Rxylt1^em1(IMPC)J/Mmjax -/+	0.041511	1.1434	0.16202	0.990	0.972
Sebox^em1(IMPC)J -/-	-1.7233	0.94513	-1.8852	0.363	0.0882
Secisbp2l^em1(IMPC)J/Mmjax -/-	-1.5469	0.75074	-1.7553	0.339	0.0526
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.88478	0.38091	-1.0866	0.306	0.0337
Sh3rf3^em1(IMPC)J/Mmjax -/-	-1.4617	0.52240	-1.5598	0.177	0.0124
Slc41a2^em1(IMPC)J/Mmjax -/-	-0.018182	0.43919	0.086973	0.990	0.967
Snx3^{tm1.1(KOMP)Vlcg} -/+	0.76111	0.37897	0.77957	0.339	0.0583
Sp5^{tm1b(KOMP)Wtsi} -/-	-1.0418	0.79048	-1.2872	0.508	0.210
Spag17^{tm1b(KOMP)Wtsi} -/-	-0.28283	0.42281	-0.26361	0.777	0.513
Spink12^em1(IMPC)J -/-	1.5079	0.41770	1.4810	0.0669	0.00134
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-0.19913	0.42113	-0.11191	0.858	0.641
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-1.0893	0.32465	-1.3463	0.0843	0.00300
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-0.39752	0.69546	-0.34157	0.817	0.573
Taco1^em1(IMPC)J/Mmjax -/+	-0.83333	0.54845	-0.84872	0.465	0.179
Taco1^em1(IMPC)J/Mmjax -/-	0.28185	0.56799	0.44895	0.858	0.624
Tat^em1(IMPC)J/Mmjax -/-	0.78208	0.80270	0.84872	0.626	0.344
Tbc1d5^em1(IMPC)J -/-	-0.12521	0.84852	0.037236	0.932	0.885
Tecpr2^em1(IMPC)J/Mmjax -/-	-0.88280	0.87694	-1.0428	0.626	0.334
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	0.29603	0.43175	0.50457	0.777	0.504
Thsd7a^{tm1b(KOMP)Mbp} -/-	-0.16184	0.52484	-0.012409	0.903	0.762
Tnnc1^em1(IMPC)J/Mmjax -/+	0.17875	0.53998	0.28940	0.897	0.744
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	-0.24891	0.41072	-0.16202	0.811	0.552
Trf^em1(IMPC)J/Mmjax -/+	2.0720	0.95579	1.7553	0.339	0.0493
Trip13^{tm1.1(KOMP)Vlcg} -/-	0.45758	0.46722	0.59110	0.626	0.340
Tspan13^em1Llp -/-	-0.81189	0.57933	-0.81366	0.465	0.180
Ttc38^em1Llp -/-	0.10693	0.50898	0.21254	0.927	0.839
Tuba8^em1(IMPC)J -/-	2.1056	1.1071	1.8852	0.363	0.0780
Ubap2^em1(IMPC)J/Mmjax -/-	-0.60769	0.62331	-0.65130	0.626	0.342
Wdr81^em1(IMPC)J -/+	-1.4125	0.86371	-1.4810	0.419	0.136
Yeats2^em1(IMPC)J/Mmjax -/+	-0.23056	0.78220	-0.59110	0.760	0.771
Zc3h7a^em1(IMPC)J/Mmjax -/-	-1.7846	0.47223	-2.0579	0.0669	0.00118
Zfp174^em1(IMPC)J -/-	1.2809	0.51766	1.1325	0.269	0.0235
Zfp329^em1(IMPC)J -/-	1.1899	0.64990	1.0866	0.363	0.0820
Zfp422^em1(IMPC)J -/-	-0.41773	0.35915	-0.39469	0.562	0.258
Zfp706^em1(IMPC)J/Mmjax -/+	-0.86340	0.55120	-0.96084	0.419	0.140

TRAIT CORRELATION PLOT

Correlate mean RBC corpuscular volume (MCV) with JaxKOMP-LAP trait: