MPD: JaxKOMP-LAP measure: time

JaxKOMP-LAP phenotype measure: time_mobile

MPD and LIMS short name	time_mobile time_spent_mobile
Phenotype description	whole arena time spent mobile, 20 min test [s]
MPD and LIMS phenotype procedure	open field test open field View protocol
MPD measure ID, data type	101264 numeric data
Number of genotypes	118 genotypes completed with analytics available, both sexes
Age at testing	66-72wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	47.998	23.814	1.1868	0.279	0.0568
Abhd17b^em1(IMPC)J -/-	50.093	23.683	1.0676	0.275	0.0465
Acadsb^em1(IMPC)J -/-	16.429	16.324	0.37739	0.643	0.324
Acy1^em1(IMPC)J -/-	-60.791	17.276	-1.9564	0.0331	0.00168
Adad2^em1(IMPC)J -/-	-1.9237	3.6585	-0.40011	0.797	0.602
Adamts14^em1(IMPC)J -/-	-5.4559	22.933	-0.56595	0.930	0.851
Adamtsl4^em1(IMPC)J -/-	-1.9159	39.317	-0.37739	0.980	0.962
Afmid^em1Llp -/-	8.5243	5.8973	0.13735	0.459	0.160
Agbl1^em1(IMPC)J/Mmjax -/-	-27.736	22.230	-1.1453	0.518	0.228
Alg8^em1(IMPC)J/Mmjax -/+	-44.804	17.217	-1.5647	0.409	0.121
Alg9^em1(IMPC)J/Mmjax -/+	40.837	28.041	0.92890	0.459	0.164
Anapc1^em1(IMPC)J/Mmjax -/+	12.762	35.662	0.26642	0.857	0.724
Apmap^em1(IMPC)J/Mmjax -/-	-16.652	18.150	-0.83563	0.679	0.367
AU040320^em1(IMPC)J -/-	46.118	32.425	1.1056	0.460	0.168
Brip1^em1(IMPC)J/Mmjax -/-	-1.2345	28.949	-0.28831	0.980	0.966
C1qc^em1(IMPC)J -/-	-18.770	24.124	-0.92890	0.686	0.444
C7^em1(IMPC)J/Mmjax -/-	-4.0375	22.449	-0.46958	0.931	0.860
Catsperz^{tm1.1(KOMP)Vlcg} -/-	8.5556	23.909	0.15864	0.857	0.723
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	27.386	7.6277	0.80613	0.0269	0.000912
Cdc42bpb^em1(IMPC)J -/+	-1.6495	5.0351	-0.35487	0.872	0.746
Cep135^em1(IMPC)J -/+	71.255	28.670	1.5647	0.189	0.0224
Cgref1^em1(IMPC)J/Mmjax -/-	48.997	17.463	1.2306	0.129	0.00980
Chmp7^em1(IMPC)J/Mmjax -/+	69.945	98.736	1.4968	0.797	0.608
Cldn13^em1(IMPC)J -/-	-25.361	28.839	-1.1056	0.685	0.388
Clptm1l^em1(IMPC)J/Mmjax -/-	3.5610	21.205	-0.052685	0.931	0.868
Cr2^em1Llp -/-	0.63918	5.0374	-0.18001	0.948	0.900
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	9.0763	5.0858	0.20146	0.320	0.0856
Dnajb2^em1(IMPC)J -/-	25.901	25.761	0.74913	0.643	0.326
Dnase1l2^em1(IMPC)J -/-	-21.173	20.635	-0.96183	0.643	0.315
Drc7^em1(IMPC)J -/-	1.7458	21.528	-0.13735	0.978	0.936
Dusp18^em1(IMPC)J/Mmjax -/-	-45.392	33.764	-1.4968	0.502	0.194
Eef1b2^em1(IMPC)J/Mmjax -/-	14.203	38.076	0.33252	0.857	0.713
Egfem1^em1(IMPC)J -/-	-1.0226	84.805	-0.24466	0.991	0.991
Fbxo10^em1(IMPC)J/Mmjax -/-	17.044	21.217	0.40011	0.685	0.430
Fkbp6^{tm1b(KOMP)Wtsi} -/-	3.5833	4.4632	-0.031601	0.685	0.427
Frmpd1^em1(IMPC)J -/-	69.200	26.505	1.4351	0.409	0.121
Gm20498^em1(IMPC)J/Mmjax -/-	-10.371	5.0746	-0.72152	0.275	0.0502
Gpr15^em1(IMPC)J -/-	17.627	29.243	0.49323	0.787	0.554
Gramd1c^{tm1b(KOMP)Wtsi} -/-	19.027	22.225	0.54140	0.685	0.400
Gramd3^em1(IMPC)J/Mmjax -/-	26.648	45.022	0.77731	0.789	0.614
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-37.658	24.425	-1.4351	0.450	0.137
Igsf11^{tm1b(KOMP)Wtsi} -/-	17.561	46.655	0.46958	0.857	0.712
Kcnc3^em1(IMPC)J -/-	88.691	34.470	1.7277	0.157	0.0174
Kcnd3^em1(IMPC)J -/-	142.32	35.077	2.3909	0.0242	0.000615
Klhl22^em1(IMPC)J/Mmjax -/-	-1.4584	5.5188	-0.33252	0.892	0.794
Krt80^em1(IMPC)J -/-	113.70	41.990	1.9564	0.129	0.0120
Kynu^em1(IMPC)J/Mmjax -/-	-30.805	33.842	-1.2306	0.679	0.374
Lpgat1^em1(IMPC)J/Mmjax -/-	12.385	26.149	0.24466	0.809	0.640
Lrp1^{tm1.1(KOMP)Wtsi} -/+	22.476	5.9030	0.61612	0.0331	0.00141
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	17.046	29.574	0.42304	0.789	0.570
Mlx^{tm1.1(KOMP)Vlcg} -/-	8.4392	4.7895	0.11611	0.320	0.0868
Mmaa^em1(IMPC)J/Mmjax -/-	-72.400	36.992	-2.1247	0.497	0.189
Nars2^em1(IMPC)J -/+	24.750	22.763	0.69446	0.703	0.473
Nt5dc1^em1(IMPC)J -/-	23.467	28.079	0.64179	0.685	0.412
Nt5dc2^em1(IMPC)J/Mmjax -/-	-45.118	21.342	-1.6408	0.275	0.0447
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	-28.039	35.809	-1.1868	0.686	0.444
Otogl^em1(IMPC)J -/-	-33.897	27.910	-1.3259	0.525	0.236
Ovch2^{tm1b(KOMP)Mbp} -/-	-4.2195	4.2467	-0.51716	0.643	0.326
Patj^em1(IMPC)J -/-	55.481	28.931	1.2768	0.319	0.0712
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	17.556	4.3529	0.44619	0.0239	0.000405
Phkb^em1(IMPC)J/Mmjax -/+	23.629	32.618	0.66789	0.703	0.477
Plod2^em1(IMPC)J/Mmjax -/+	1.8213	37.426	-0.11611	0.980	0.962
Polr1c^em1(IMPC)J/Mmjax -/+	-16.800	35.924	-0.86588	0.809	0.645
Prss2^{tm1.1(KOMP)Vlcg} -/-	-10.049	33.480	-0.69446	0.879	0.767
Ptprk^em1(IMPC)J/Mmjax -/-	21.997	24.043	0.59085	0.679	0.372
Pus1^em1(IMPC)J/Mmjax -/-	-9.2484	6.3411	-0.64179	0.459	0.155
Rab34^{tm1b(EUCOMM)Hmgu} -/+	7.7731	5.5722	0.094931	0.468	0.172
Rad21l^{tm1b(KOMP)Wtsi} -/-	6.2226	5.0098	0.031601	0.515	0.221
Rbpms2^em1(IMPC)J -/-	-31.291	23.232	-1.2768	0.502	0.198
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	3.4642	6.3370	-0.073791	0.789	0.588
Rgs22^{tm1b(KOMP)Wtsi} -/-	6.1373	7.4461	0.010532	0.685	0.417
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-1.3373	8.6456	-0.31034	0.933	0.878
Rnf10^em1(IMPC)J -/-	58.427	29.745	1.3784	0.297	0.0629
Rtl10^em1(IMPC)J/Mmjax -/-	41.274	27.880	0.96183	0.459	0.152
Rxylt1^em1(IMPC)J/Mmjax -/+	-12.457	29.253	-0.74913	0.838	0.675
Sebox^em1(IMPC)J -/-	18.546	19.293	0.51716	0.669	0.346
Secisbp2l^em1(IMPC)J/Mmjax -/-	14.261	5.0763	0.35487	0.129	0.00895
Sel1l3^em1(IMPC)J/Mmjax -/-	-22.149	19.249	-0.99584	0.689	0.455
Serpina1f^em1(IMPC)J -/-	44.961	19.952	1.0310	0.243	0.0350
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.86372	3.4543	-0.22301	0.895	0.804
Sh3rf3^em1(IMPC)J/Mmjax -/-	13.078	6.0039	0.28831	0.268	0.0409
Slc41a2^em1(IMPC)J/Mmjax -/-	7.4434	5.9571	0.073791	0.515	0.223
Slc9a9^em1(IMPC)J/Mmjax -/-	39.378	19.330	0.86588	0.275	0.0512
Snx3^{tm1.1(KOMP)Vlcg} -/+	9.9684	5.8605	0.22301	0.319	0.0987
Sp5^{tm1b(KOMP)Wtsi} -/-	75.870	27.603	1.6408	0.129	0.0120
Spag17^{tm1b(KOMP)Wtsi} -/-	-2.3729	2.7987	-0.42304	0.685	0.405
Spink12^em1(IMPC)J -/-	-16.098	20.857	-0.80613	0.686	0.447
Sprr1a^em1(IMPC)J -/-	-47.065	26.136	-1.7277	0.320	0.0861
Srbd1^em1(IMPC)J/Mmjax -/+	19.425	34.594	0.56595	0.789	0.583
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-8.1618	6.9429	-0.61612	0.542	0.248
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-2.6835	5.4160	-0.44619	0.799	0.623
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-0.19054	5.3416	-0.20146	0.980	0.972
Taco1^em1(IMPC)J/Mmjax -/+	0.82023	2.7028	-0.15864	0.879	0.766
Taco1^em1(IMPC)J/Mmjax -/-	-1.0912	5.3345	-0.26642	0.926	0.839
Tat^em1(IMPC)J/Mmjax -/-	13.140	5.4631	0.31034	0.191	0.0239
Tbc1d5^em1(IMPC)J -/-	40.645	32.000	0.89695	0.515	0.221
Tctn3^em1(IMPC)J/Mmjax -/+	25.218	17.312	0.72152	0.459	0.162
Tecpr2^em1(IMPC)J/Mmjax -/-	29.437	29.251	0.83563	0.643	0.327
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	55.927	21.227	1.3259	0.146	0.0148
Thsd7a^{tm1b(KOMP)Mbp} -/-	99.268	18.159	1.8302	0.00103	0.00000872
Tnnc1^em1(IMPC)J/Mmjax -/+	-35.184	23.628	-1.3784	0.459	0.151
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	-5.2622	5.0407	-0.54140	0.571	0.305
Tpk1^em1(IMPC)J/Mmjax -/+	8.6992	31.087	0.18001	0.889	0.782
Trip13^{tm1.1(KOMP)Vlcg} -/-	6.5631	5.1551	0.052685	0.502	0.212
Tspan13^em1Llp -/-	-4.0407	5.7792	-0.49323	0.714	0.490
Ttc38^em1Llp -/-	4.1187	8.1277	-0.010532	0.799	0.619
Tuba8^em1(IMPC)J -/-	128.34	46.424	2.1247	0.129	0.0113
Tubb2a^em1(IMPC)J -/-	46.294	26.185	1.1453	0.325	0.0909
Ubap2^em1(IMPC)J/Mmjax -/-	3.0267	3.2156	-0.094931	0.673	0.353
Utp4^em1(IMPC)J/Mmjax -/+	-22.914	28.162	-1.0310	0.685	0.425
Wdr81^em1(IMPC)J -/+	-7.2105	20.366	-0.59085	0.857	0.726
Yeats2^em1(IMPC)J/Mmjax -/+	-25.126	38.411	-1.0676	0.758	0.526
Zc3h7a^em1(IMPC)J/Mmjax -/-	-9.6955	5.3232	-0.66789	0.319	0.0771
Zfp174^em1(IMPC)J -/-	-14.911	27.122	-0.77731	0.789	0.587
Zfp329^em1(IMPC)J -/-	-47.664	23.700	-1.8302	0.279	0.0552
Zfp422^em1(IMPC)J -/-	44.249	24.244	0.99584	0.319	0.0773
Zfp706^em1(IMPC)J/Mmjax -/+	-17.473	20.910	-0.89695	0.685	0.414
Zfp827^em1(IMPC)J/Mmjax -/-	-139.81	51.242	-2.3909	0.191	0.0259

TRAIT CORRELATION PLOT

Correlate whole arena time spent mobile, 20 min test with JaxKOMP-LAP trait: