MPD: JaxKOMP-LAP measure: pct_center

JaxKOMP-LAP phenotype measure: pct_center_slope

MPD and LIMS short name	pct_center_slope pcttime_center_slope
Phenotype description	percentage of total time in center of arena, slope, 20 min test
MPD and LIMS phenotype procedure	open field test open field View protocol
MPD measure ID, data type	101256 numeric data
Number of genotypes	118 genotypes completed with analytics available, both sexes
Age at testing	66-72wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-5.4018	4.0731	-1.4968	0.744	0.200
Abhd17b^em1(IMPC)J -/-	2.8255	2.2456	1.0310	0.744	0.221
Acadsb^em1(IMPC)J -/-	0.12049	1.7478	0.18001	0.947	0.946
Acy1^em1(IMPC)J -/-	-1.7565	2.2784	-0.33252	0.777	0.448
Adad2^em1(IMPC)J -/-	0.73681	2.5915	0.42304	0.891	0.778
Adamts14^em1(IMPC)J -/-	1.4763	7.6818	0.61612	0.947	0.879
Adamtsl4^em1(IMPC)J -/-	-2.1997	2.0902	-0.46958	0.744	0.304
Afmid^em1Llp -/-	-0.77083	1.8548	-0.010532	0.864	0.681
Agbl1^em1(IMPC)J/Mmjax -/-	1.4872	3.3049	0.66789	0.863	0.657
Alg8^em1(IMPC)J/Mmjax -/+	-0.45775	1.9844	0.031601	0.943	0.839
Alg9^em1(IMPC)J/Mmjax -/+	-1.9117	3.4751	-0.40011	0.845	0.588
Anapc1^em1(IMPC)J/Mmjax -/+	-2.7738	3.1933	-0.69446	0.775	0.396
Apmap^em1(IMPC)J/Mmjax -/-	-0.33345	1.9803	0.094931	0.947	0.867
AU040320^em1(IMPC)J -/-	3.5056	2.2462	1.2306	0.744	0.132
Brip1^em1(IMPC)J/Mmjax -/-	-2.0180	2.5672	-0.42304	0.777	0.441
C1qc^em1(IMPC)J -/-	-4.1788	2.9109	-1.1868	0.744	0.163
C7^em1(IMPC)J/Mmjax -/-	2.8288	4.2312	1.0676	0.798	0.514
Catsperz^{tm1.1(KOMP)Vlcg} -/-	-4.7732	2.6577	-1.3784	0.721	0.0829
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	4.0830	2.3201	1.3259	0.721	0.0856
Cdc42bpb^em1(IMPC)J -/+	3.6937	3.6140	1.2768	0.744	0.318
Cep135^em1(IMPC)J -/+	2.3584	2.0768	0.83563	0.744	0.271
Cgref1^em1(IMPC)J/Mmjax -/-	1.3108	1.9208	0.54140	0.798	0.502
Chmp7^em1(IMPC)J/Mmjax -/+	-3.0071	2.3015	-0.86588	0.775	0.416
Cldn13^em1(IMPC)J -/-	0.81778	2.4741	0.44619	0.891	0.744
Clptm1l^em1(IMPC)J/Mmjax -/-	-2.8633	2.1102	-0.77731	0.744	0.189
Cr2^em1Llp -/-	-1.3175	1.9838	-0.22301	0.798	0.512
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	-4.3109	2.2299	-1.2768	0.721	0.0638
Dnajb2^em1(IMPC)J -/-	-0.17659	2.6498	0.13735	0.947	0.947
Dnase1l2^em1(IMPC)J -/-	0.65506	1.6754	0.37739	0.878	0.699
Drc7^em1(IMPC)J -/-	1.4767	2.6080	0.64179	0.845	0.577
Dusp18^em1(IMPC)J/Mmjax -/-	-2.4802	3.1073	-0.66789	0.775	0.434
Eef1b2^em1(IMPC)J/Mmjax -/-	0.24917	2.8267	0.20146	0.947	0.931
Egfem1^em1(IMPC)J -/-	-0.88277	1.5490	-0.073791	0.863	0.626
Fbxo10^em1(IMPC)J/Mmjax -/-	0.55796	1.9054	0.35487	0.891	0.772
Fkbp6^{tm1b(KOMP)Wtsi} -/-	1.4204	2.1474	0.56595	0.798	0.513
Frmpd1^em1(IMPC)J -/-	2.1417	2.8937	0.77731	0.811	0.536
Gm20498^em1(IMPC)J/Mmjax -/-	-0.69032	2.2803	0.010532	0.891	0.764
Gpr15^em1(IMPC)J -/-	2.8174	3.5853	0.99584	0.777	0.442
Gramd1c^{tm1b(KOMP)Wtsi} -/-	-2.8324	3.4551	-0.74913	0.775	0.420
Gramd3^em1(IMPC)J/Mmjax -/-	1.9497	3.4084	0.74913	0.863	0.625
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-0.94330	2.0632	-0.094931	0.863	0.652
Igsf11^{tm1b(KOMP)Wtsi} -/-	0.69754	2.2075	0.40011	0.891	0.757
Kcnc3^em1(IMPC)J -/-	4.5660	3.1671	1.5647	0.744	0.163
Kcnd3^em1(IMPC)J -/-	-2.7871	1.9134	-0.72152	0.744	0.161
Klhl22^em1(IMPC)J/Mmjax -/-	-1.3755	3.0176	-0.24466	0.863	0.652
Krt80^em1(IMPC)J -/-	-1.4465	1.6394	-0.26642	0.775	0.386
Kynu^em1(IMPC)J/Mmjax -/-	-1.0465	3.0709	-0.11611	0.891	0.737
Lpgat1^em1(IMPC)J/Mmjax -/-	3.041	2.7987	1.1056	0.744	0.287
Lrp1^{tm1.1(KOMP)Wtsi} -/+	1.1785	2.7223	0.51716	0.864	0.671
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	1.0969	2.0324	0.49323	0.845	0.594
Mlx^{tm1.1(KOMP)Vlcg} -/-	-4.1973	2.8105	-1.2306	0.744	0.144
Mmaa^em1(IMPC)J/Mmjax -/-	-5.6659	4.7638	-1.7277	0.755	0.356
Nars2^em1(IMPC)J -/+	0.30231	2.2664	0.24466	0.947	0.916
Nt5dc1^em1(IMPC)J -/-	0.37337	3.0400	0.26642	0.947	0.903
Nt5dc2^em1(IMPC)J/Mmjax -/-	-2.9706	2.5469	-0.80613	0.744	0.254
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	4.1997	3.5060	1.4351	0.744	0.247
Otogl^em1(IMPC)J -/-	-0.37864	2.4331	0.073791	0.947	0.878
Ovch2^{tm1b(KOMP)Mbp} -/-	-0.13824	1.8341	0.15864	0.947	0.940
Patj^em1(IMPC)J -/-	-3.3926	3.2745	-0.96183	0.744	0.314
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	-1.2505	1.6899	-0.20146	0.785	0.466
Phkb^em1(IMPC)J/Mmjax -/+	-3.6658	3.4317	-1.0310	0.744	0.298
Plod2^em1(IMPC)J/Mmjax -/+	-2.9757	3.5567	-0.83563	0.775	0.412
Polr1c^em1(IMPC)J/Mmjax -/+	-4.481	2.7662	-1.3259	0.744	0.120
Prss2^{tm1.1(KOMP)Vlcg} -/-	-5.5976	5.5018	-1.6408	0.744	0.321
Ptprk^em1(IMPC)J/Mmjax -/-	4.0986	4.4093	1.3784	0.755	0.365
Pus1^em1(IMPC)J/Mmjax -/-	-2.0688	2.2313	-0.44619	0.755	0.360
Rab34^{tm1b(EUCOMM)Hmgu} -/+	0.39208	2.2481	0.28831	0.947	0.863
Rad21l^{tm1b(KOMP)Wtsi} -/-	-3.2586	1.5861	-0.89695	0.721	0.0456
Rbpms2^em1(IMPC)J -/-	-2.6812	3.8115	-0.64179	0.798	0.493
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	-0.80972	2.4090	-0.031601	0.891	0.739
Rgs22^{tm1b(KOMP)Wtsi} -/-	-1.8375	1.6650	-0.35487	0.744	0.278
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-6.1326	2.6741	-1.9564	0.667	0.0283
Rnf10^em1(IMPC)J -/-	-3.5929	1.8994	-0.99584	0.721	0.0718
Rtl10^em1(IMPC)J/Mmjax -/-	-0.32983	2.6150	0.11611	0.947	0.901
Rxylt1^em1(IMPC)J/Mmjax -/+	-3.7951	2.7593	-1.0676	0.744	0.186
Sebox^em1(IMPC)J -/-	-2.4255	2.5822	-0.59085	0.755	0.357
Secisbp2l^em1(IMPC)J/Mmjax -/-	-1.4715	1.9778	-0.28831	0.785	0.463
Sel1l3^em1(IMPC)J/Mmjax -/-	-2.2305	1.1686	-0.49323	0.744	0.307
Serpina1f^em1(IMPC)J -/-	-1.2253	2.7288	-0.18001	0.863	0.658
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	2.4193	2.0121	0.92890	0.744	0.239
Sh3rf3^em1(IMPC)J/Mmjax -/-	0.46420	1.7870	0.33252	0.905	0.798
Slc41a2^em1(IMPC)J/Mmjax -/-	-1.6141	2.6961	-0.31034	0.828	0.555
Slc9a9^em1(IMPC)J/Mmjax -/-	1.9159	1.7620	0.69446	0.744	0.286
Snx3^{tm1.1(KOMP)Vlcg} -/+	-1.0821	2.5823	-0.13735	0.864	0.678
Sp5^{tm1b(KOMP)Wtsi} -/-	-6.9697	1.9782	-2.1247	0.119	0.00202
Spag17^{tm1b(KOMP)Wtsi} -/-	3.2654	2.5348	1.1453	0.744	0.209
Spink12^em1(IMPC)J -/-	-0.87550	1.6244	-0.052685	0.845	0.594
Sprr1a^em1(IMPC)J -/-	0.29119	2.6579	0.22301	0.947	0.914
Srbd1^em1(IMPC)J/Mmjax -/+	2.5162	2.8534	0.96183	0.775	0.390
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-4.0994	2.9092	-1.1453	0.744	0.168
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-3.2938	2.5168	-0.92890	0.744	0.199
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-2.4230	2.1711	-0.56595	0.744	0.271
Taco1^em1(IMPC)J/Mmjax -/+	5.2177	3.1681	1.8302	0.744	0.124
Taco1^em1(IMPC)J/Mmjax -/-	3.5041	2.2285	1.1868	0.744	0.125
Tat^em1(IMPC)J/Mmjax -/-	4.2326	2.2912	1.4968	0.721	0.0761
Tbc1d5^em1(IMPC)J -/-	4.7390	2.8760	1.6408	0.744	0.118
Tctn3^em1(IMPC)J/Mmjax -/+	1.4377	3.1448	0.59085	0.863	0.653
Tecpr2^em1(IMPC)J/Mmjax -/-	-5.7799	2.5287	-1.8302	0.667	0.0339
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	-1.0936	1.7209	-0.15864	0.811	0.531
Thsd7a^{tm1b(KOMP)Mbp} -/-	2.4017	1.9788	0.89695	0.744	0.235
Tnnc1^em1(IMPC)J/Mmjax -/+	4.8910	2.6590	1.7277	0.721	0.0794
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	0.41054	2.7575	0.31034	0.947	0.883
Tpk1^em1(IMPC)J/Mmjax -/+	0.82441	2.7348	0.46958	0.891	0.766
Trip13^{tm1.1(KOMP)Vlcg} -/-	-2.5504	2.6279	-0.61612	0.755	0.339
Tspan13^em1Llp -/-	-3.8472	2.3695	-1.1056	0.744	0.116
Ttc38^em1Llp -/-	-2.3455	3.2012	-0.54140	0.789	0.475
Tuba8^em1(IMPC)J -/-	-2.3426	2.9229	-0.51716	0.777	0.431
Tubb2a^em1(IMPC)J -/-	6.6141	2.5763	2.1247	0.518	0.0176
Ubap2^em1(IMPC)J/Mmjax -/-	-1.8791	2.0330	-0.37739	0.755	0.362
Utp4^em1(IMPC)J/Mmjax -/+	-7.1535	2.5627	-2.3909	0.430	0.0109
Wdr81^em1(IMPC)J -/+	2.3824	1.8444	0.86588	0.744	0.208
Yeats2^em1(IMPC)J/Mmjax -/+	5.3742	3.8392	1.9564	0.744	0.189
Zc3h7a^em1(IMPC)J/Mmjax -/-	-5.4863	2.9203	-1.5647	0.721	0.0686
Zfp174^em1(IMPC)J -/-	1.9246	1.8405	0.72152	0.744	0.306
Zfp329^em1(IMPC)J -/-	10.973	2.8054	2.3909	0.0695	0.000589
Zfp422^em1(IMPC)J -/-	-0.41327	1.2314	0.052685	0.891	0.739
Zfp706^em1(IMPC)J/Mmjax -/+	2.3174	2.2759	0.80613	0.744	0.321
Zfp827^em1(IMPC)J/Mmjax -/-	-5.0643	3.1797	-1.4351	0.744	0.146

TRAIT CORRELATION PLOT

Correlate percentage of total time in center of arena, slope, 20 min test with JaxKOMP-LAP trait: