MPD: JaxKOMP-LAP measure: rears

JaxKOMP-LAP phenotype measure: rears_4

MPD and LIMS short name	rears_4 number_of_rears_fourth_five_minutes
Phenotype description	number of rears in 5 min bins, 20 min test, 4th 5min [n]
MPD and LIMS phenotype procedure	open field test open field View protocol
MPD measure ID, data type	101252 numeric data
Number of genotypes	118 genotypes completed with analytics available, both sexes
Age at testing	66-72wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-4.8910	5.3485	-0.96183	0.674	0.371
Abhd17b^em1(IMPC)J -/-	0.95547	4.9655	-0.28831	0.879	0.849
Acadsb^em1(IMPC)J -/-	-1.8982	3.0592	-0.51716	0.777	0.540
Acy1^em1(IMPC)J -/-	-5.4656	3.7103	-1.0676	0.432	0.153
Adad2^em1(IMPC)J -/-	3.1139	3.6148	0.26642	0.684	0.394
Adamts14^em1(IMPC)J -/-	1.1444	3.5079	-0.20146	0.876	0.799
Adamtsl4^em1(IMPC)J -/-	1.2362	4.2298	-0.15864	0.876	0.773
Afmid^em1Llp -/-	-2.1004	4.4745	-0.54140	0.824	0.643
Agbl1^em1(IMPC)J/Mmjax -/-	-0.84000	3.9275	-0.42304	0.876	0.832
Alg8^em1(IMPC)J/Mmjax -/+	-2.8884	4.1055	-0.64179	0.777	0.555
Alg9^em1(IMPC)J/Mmjax -/+	2.9058	4.3066	0.24466	0.770	0.509
Anapc1^em1(IMPC)J/Mmjax -/+	2.1667	7.7994	0.052685	0.876	0.784
Apmap^em1(IMPC)J/Mmjax -/-	-4.5442	2.7731	-0.89695	0.413	0.112
AU040320^em1(IMPC)J -/-	-10.600	4.9424	-1.7277	0.289	0.0423
Brip1^em1(IMPC)J/Mmjax -/-	-1.3360	5.3017	-0.49323	0.876	0.803
C1qc^em1(IMPC)J -/-	-5.5088	3.1798	-1.1056	0.413	0.0955
C7^em1(IMPC)J/Mmjax -/-	4.7500	4.0301	0.51716	0.561	0.257
Catsperz^{tm1.1(KOMP)Vlcg} -/-	10.488	4.2833	1.4968	0.187	0.0206
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-12.517	3.2307	-1.9564	0.0212	0.000360
Cdc42bpb^em1(IMPC)J -/+	-2.8131	4.0998	-0.59085	0.770	0.500
Cep135^em1(IMPC)J -/+	6.2623	3.6778	0.77731	0.413	0.105
Cgref1^em1(IMPC)J/Mmjax -/-	3.3613	3.8624	0.28831	0.684	0.393
Chmp7^em1(IMPC)J/Mmjax -/+	-0.71480	9.7128	-0.37739	0.961	0.953
Cldn13^em1(IMPC)J -/-	-6.6179	4.0802	-1.1868	0.424	0.118
Clptm1l^em1(IMPC)J/Mmjax -/-	15.022	5.9594	1.9564	0.187	0.0199
Cr2^em1Llp -/-	10.717	3.8119	1.6408	0.178	0.00861
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	2.8877	4.0686	0.22301	0.770	0.484
Dnajb2^em1(IMPC)J -/-	7.9012	3.7863	1.1453	0.299	0.0482
Dnase1l2^em1(IMPC)J -/-	-0.013877	3.3571	-0.35487	0.997	0.997
Drc7^em1(IMPC)J -/-	2.6402	3.7717	0.20146	0.770	0.492
Dusp18^em1(IMPC)J/Mmjax -/-	-3.9343	4.5582	-0.72152	0.689	0.398
Eef1b2^em1(IMPC)J/Mmjax -/-	-13.031	4.7386	-2.1247	0.178	0.0123
Egfem1^em1(IMPC)J -/-	-4.4414	7.8360	-0.86588	0.814	0.628
Fbxo10^em1(IMPC)J/Mmjax -/-	1.0999	4.8699	-0.24466	0.876	0.823
Fkbp6^{tm1b(KOMP)Wtsi} -/-	4.4576	2.9314	0.49323	0.432	0.137
Frmpd1^em1(IMPC)J -/-	3.4701	5.0970	0.31034	0.777	0.566
Gm20498^em1(IMPC)J/Mmjax -/-	-3.2447	3.5589	-0.66789	0.674	0.369
Gpr15^em1(IMPC)J -/-	5.2723	4.4647	0.59085	0.561	0.252
Gramd1c^{tm1b(KOMP)Wtsi} -/-	-5.7489	3.4660	-1.1453	0.413	0.110
Gramd3^em1(IMPC)J/Mmjax -/-	5.2088	7.5613	0.56595	0.777	0.562
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-5.2650	4.1872	-1.0310	0.523	0.222
Igsf11^{tm1b(KOMP)Wtsi} -/-	5.1550	5.3209	0.54140	0.664	0.349
Kcnc3^em1(IMPC)J -/-	9.4151	4.9238	1.4351	0.384	0.0684
Kcnd3^em1(IMPC)J -/-	7.3870	5.6446	0.96183	0.518	0.206
Klhl22^em1(IMPC)J/Mmjax -/-	-4.7168	6.3631	-0.92890	0.752	0.465
Krt80^em1(IMPC)J -/-	15.650	6.1105	2.3909	0.178	0.0166
Kynu^em1(IMPC)J/Mmjax -/-	-6.7147	5.2129	-1.2306	0.520	0.213
Lpgat1^em1(IMPC)J/Mmjax -/-	-4.35	4.9166	-0.83563	0.684	0.384
Lrp1^{tm1.1(KOMP)Wtsi} -/+	6.2358	5.7404	0.74913	0.587	0.293
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	1.0000	5.6000	-0.26642	0.882	0.860
Mlx^{tm1.1(KOMP)Vlcg} -/-	5.8685	4.0244	0.72152	0.432	0.154
Mmaa^em1(IMPC)J/Mmjax -/-	-11.303	7.6587	-1.8302	0.578	0.278
Nars2^em1(IMPC)J -/+	2.5949	4.8596	0.15864	0.839	0.688
Nt5dc1^em1(IMPC)J -/-	0.93362	4.5509	-0.31034	0.876	0.839
Nt5dc2^em1(IMPC)J/Mmjax -/-	-3.4114	3.4322	-0.69446	0.638	0.330
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	-1.2241	5.6543	-0.44619	0.876	0.831
Otogl^em1(IMPC)J -/-	-7.6219	3.4739	-1.2768	0.282	0.0377
Ovch2^{tm1b(KOMP)Mbp} -/-	1.7677	2.8494	-0.073791	0.777	0.538
Patj^em1(IMPC)J -/-	1.9167	6.1447	-0.052685	0.876	0.759
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	10.951	2.6379	1.7277	0.0212	0.000296
Phkb^em1(IMPC)J/Mmjax -/+	5.5899	4.8442	0.69446	0.561	0.261
Plod2^em1(IMPC)J/Mmjax -/+	-10.362	5.7970	-1.6408	0.413	0.0883
Polr1c^em1(IMPC)J/Mmjax -/+	1.3608	4.8453	-0.11611	0.876	0.782
Prss2^{tm1.1(KOMP)Vlcg} -/-	0.40233	3.0933	-0.33252	0.913	0.898
Ptprk^em1(IMPC)J/Mmjax -/-	2.2632	3.8528	0.094931	0.777	0.564
Pus1^em1(IMPC)J/Mmjax -/-	7.5708	5.1725	1.0676	0.432	0.153
Rab34^{tm1b(EUCOMM)Hmgu} -/+	7.3558	4.1705	0.92890	0.413	0.0868
Rad21l^{tm1b(KOMP)Wtsi} -/-	5.4954	3.7440	0.66789	0.432	0.149
Rbpms2^em1(IMPC)J -/-	-4.2500	2.6972	-0.80613	0.432	0.136
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	6.6880	4.9207	0.83563	0.480	0.183
Rgs22^{tm1b(KOMP)Wtsi} -/-	5.3236	4.5584	0.64179	0.561	0.251
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-2.8783	5.5737	-0.61612	0.807	0.609
Rnf10^em1(IMPC)J -/-	11.722	4.2351	1.8302	0.178	0.0115
Rtl10^em1(IMPC)J/Mmjax -/-	10.705	3.6741	1.5647	0.178	0.00761
Rxylt1^em1(IMPC)J/Mmjax -/+	-7.7857	4.6329	-1.3259	0.413	0.109
Sebox^em1(IMPC)J -/-	4.1846	3.8842	0.40011	0.587	0.292
Secisbp2l^em1(IMPC)J/Mmjax -/-	4.4408	5.3037	0.46958	0.689	0.410
Sel1l3^em1(IMPC)J/Mmjax -/-	-4.0582	7.2538	-0.77731	0.839	0.675
Serpina1f^em1(IMPC)J -/-	2.5726	5.6806	0.13735	0.824	0.655
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	2.2270	3.4234	0.073791	0.771	0.520
Sh3rf3^em1(IMPC)J/Mmjax -/-	2.6322	5.3127	0.18001	0.814	0.626
Slc41a2^em1(IMPC)J/Mmjax -/-	1.1287	3.4185	-0.22301	0.876	0.744
Slc9a9^em1(IMPC)J/Mmjax -/-	4.3043	3.5996	0.42304	0.559	0.241
Snx3^{tm1.1(KOMP)Vlcg} -/+	6.5919	3.1490	0.80613	0.289	0.0441
Sp5^{tm1b(KOMP)Wtsi} -/-	7.4291	4.8978	0.99584	0.432	0.144
Spag17^{tm1b(KOMP)Wtsi} -/-	2.1325	3.2917	0.031601	0.771	0.523
Spink12^em1(IMPC)J -/-	7.7360	4.9891	1.1056	0.432	0.134
Sprr1a^em1(IMPC)J -/-	1.9244	4.2640	-0.031601	0.824	0.656
Srbd1^em1(IMPC)J/Mmjax -/+	2.0824	7.6202	0.010532	0.876	0.788
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-3.8714	4.6886	-0.74913	0.689	0.415
Svep1^{tm1b(EUCOMM)Hmgu} -/+	1.1574	3.4972	-0.18001	0.876	0.743
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-8.4136	3.8314	-1.3784	0.282	0.0341
Taco1^em1(IMPC)J/Mmjax -/+	1.7095	2.9824	-0.094931	0.782	0.576
Taco1^em1(IMPC)J/Mmjax -/-	-4.9413	3.5286	-0.99584	0.469	0.171
Tat^em1(IMPC)J/Mmjax -/-	-1.1405	4.6975	-0.46958	0.876	0.810
Tbc1d5^em1(IMPC)J -/-	8.5000	4.4898	1.2768	0.387	0.0745
Tctn3^em1(IMPC)J/Mmjax -/+	7.4474	4.4567	1.0310	0.413	0.112
Tecpr2^em1(IMPC)J/Mmjax -/-	2.4998	3.3528	0.11611	0.752	0.465
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	-0.82676	3.5371	-0.40011	0.876	0.817
Thsd7a^{tm1b(KOMP)Mbp} -/-	1.3054	3.3345	-0.13735	0.841	0.698
Tnnc1^em1(IMPC)J/Mmjax -/+	5.2927	3.8818	0.61612	0.480	0.187
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	8.4131	3.6071	1.3259	0.178	0.0271
Tpk1^em1(IMPC)J/Mmjax -/+	1.9725	5.0022	-0.010532	0.839	0.697
Trip13^{tm1.1(KOMP)Vlcg} -/-	15.395	5.3574	2.1247	0.178	0.00705
Tspan13^em1Llp -/-	4.4346	4.3266	0.44619	0.618	0.314
Ttc38^em1Llp -/-	7.1494	5.5509	0.89695	0.520	0.216
Tuba8^em1(IMPC)J -/-	6.9413	6.2633	0.86588	0.578	0.279
Tubb2a^em1(IMPC)J -/-	9.3529	4.8000	1.3784	0.379	0.0642
Ubap2^em1(IMPC)J/Mmjax -/-	3.8745	2.8730	0.37739	0.480	0.187
Utp4^em1(IMPC)J/Mmjax -/+	-9.2746	4.9571	-1.4968	0.387	0.0753
Wdr81^em1(IMPC)J -/+	-9.0395	3.2485	-1.4351	0.178	0.00991
Yeats2^em1(IMPC)J/Mmjax -/+	3.7784	5.5507	0.35487	0.770	0.509
Zc3h7a^em1(IMPC)J/Mmjax -/-	-10.331	4.0390	-1.5647	0.178	0.0150
Zfp174^em1(IMPC)J -/-	3.7046	4.0568	0.33252	0.674	0.370
Zfp329^em1(IMPC)J -/-	-2.1363	4.0089	-0.56595	0.803	0.599
Zfp422^em1(IMPC)J -/-	7.9949	4.6385	1.1868	0.413	0.0944
Zfp706^em1(IMPC)J/Mmjax -/+	8.3152	5.3873	1.2306	0.432	0.139
Zfp827^em1(IMPC)J/Mmjax -/-	-22.300	8.9965	-2.3909	0.282	0.0382

TRAIT CORRELATION PLOT

Correlate number of rears in 5 min bins, 20 min test with JaxKOMP-LAP trait: