MPD: JaxKOMP-LAP measure: rears

JaxKOMP-LAP phenotype measure: rears_1

MPD and LIMS short name	rears_1 number_of_rears_first_five_minutes
Phenotype description	number of rears in 5 min bins, 20 min test, 1st 5min [n]
MPD and LIMS phenotype procedure	open field test open field View protocol
MPD measure ID, data type	101249 numeric data
Number of genotypes	118 genotypes completed with analytics available, both sexes
Age at testing	66-72wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-8.9278	3.2870	-1.8302	0.165	0.0133
Abhd17b^em1(IMPC)J -/-	0.90318	2.9945	0.13735	0.950	0.766
Acadsb^em1(IMPC)J -/-	2.1293	1.4123	0.44619	0.505	0.144
Acy1^em1(IMPC)J -/-	-3.9294	2.0972	-0.96183	0.404	0.0727
Adad2^em1(IMPC)J -/-	-0.19119	2.3023	0.031601	0.956	0.934
Adamts14^em1(IMPC)J -/-	6.0095	20.686	1.2768	0.943	0.820
Adamtsl4^em1(IMPC)J -/-	-0.095522	2.7587	0.052685	0.973	0.973
Afmid^em1Llp -/-	-3.1398	2.9713	-0.77731	0.681	0.300
Agbl1^em1(IMPC)J/Mmjax -/-	1.0120	2.4433	0.22301	0.936	0.682
Alg8^em1(IMPC)J/Mmjax -/+	-4.7202	3.0338	-1.1868	0.681	0.260
Alg9^em1(IMPC)J/Mmjax -/+	3.9787	2.7760	0.96183	0.530	0.167
Anapc1^em1(IMPC)J/Mmjax -/+	-0.71429	4.0375	-0.26642	0.950	0.861
Apmap^em1(IMPC)J/Mmjax -/-	-1.2676	1.3708	-0.42304	0.768	0.363
AU040320^em1(IMPC)J -/-	-1.6556	3.0931	-0.54140	0.917	0.597
Brip1^em1(IMPC)J/Mmjax -/-	-0.63563	2.5516	-0.24466	0.943	0.806
C1qc^em1(IMPC)J -/-	-1.3663	2.6080	-0.46958	0.917	0.605
C7^em1(IMPC)J/Mmjax -/-	-2.7618	3.3079	-0.74913	0.783	0.418
Catsperz^{tm1.1(KOMP)Vlcg} -/-	1.9685	2.5295	0.42304	0.794	0.443
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-9.1393	2.8463	-1.9564	0.0782	0.00265
Cdc42bpb^em1(IMPC)J -/+	1.5105	4.4612	0.35487	0.943	0.738
Cep135^em1(IMPC)J -/+	3.7233	2.3955	0.86588	0.505	0.138
Cgref1^em1(IMPC)J/Mmjax -/-	5.5724	2.1009	1.2306	0.165	0.0139
Chmp7^em1(IMPC)J/Mmjax -/+	8.3983	11.740	1.7277	0.917	0.605
Cldn13^em1(IMPC)J -/-	-10.889	2.8060	-2.3909	0.0465	0.000756
Clptm1l^em1(IMPC)J/Mmjax -/-	9.0087	5.2347	1.8302	0.454	0.100
Cr2^em1Llp -/-	-1.4017	2.5458	-0.49323	0.917	0.586
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	3.0870	2.8007	0.61612	0.681	0.280
Dnajb2^em1(IMPC)J -/-	6.0138	2.0637	1.3259	0.118	0.00781
Dnase1l2^em1(IMPC)J -/-	-5.3698	3.7754	-1.4351	0.530	0.167
Drc7^em1(IMPC)J -/-	-3.8272	1.9881	-0.86588	0.404	0.0679
Dusp18^em1(IMPC)J/Mmjax -/-	-2.7849	2.9549	-0.69446	0.768	0.357
Eef1b2^em1(IMPC)J/Mmjax -/-	-4.4724	3.8169	-0.99584	0.681	0.255
Egfem1^em1(IMPC)J -/-	-5.1322	4.9646	-1.2768	0.780	0.410
Fbxo10^em1(IMPC)J/Mmjax -/-	4.1875	2.7837	0.99584	0.505	0.146
Fkbp6^{tm1b(KOMP)Wtsi} -/-	2.5058	2.1322	0.56595	0.679	0.247
Frmpd1^em1(IMPC)J -/-	0.93756	2.6761	0.20146	0.943	0.760
Gm20498^em1(IMPC)J/Mmjax -/-	-2.4368	2.7216	-0.66789	0.768	0.378
Gpr15^em1(IMPC)J -/-	6.0667	2.8821	1.3784	0.339	0.0488
Gramd1c^{tm1b(KOMP)Wtsi} -/-	-4.5949	3.1348	-1.0676	0.525	0.156
Gramd3^em1(IMPC)J/Mmjax -/-	-0.54369	2.4051	-0.18001	0.950	0.842
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-4.6553	2.4931	-1.1453	0.404	0.0752
Igsf11^{tm1b(KOMP)Wtsi} -/-	1.6691	4.5840	0.37739	0.936	0.722
Kcnc3^em1(IMPC)J -/-	5.4682	3.3654	1.1868	0.497	0.118
Kcnd3^em1(IMPC)J -/-	6.1325	3.2248	1.4351	0.404	0.0717
Klhl22^em1(IMPC)J/Mmjax -/-	-2.1024	3.5528	-0.59085	0.917	0.560
Krt80^em1(IMPC)J -/-	12.042	4.1901	2.3909	0.118	0.00797
Kynu^em1(IMPC)J/Mmjax -/-	-1.7362	4.7929	-0.56595	0.936	0.721
Lpgat1^em1(IMPC)J/Mmjax -/-	-0.87860	2.8004	-0.28831	0.943	0.756
Lrp1^{tm1.1(KOMP)Wtsi} -/+	5.3080	4.6868	1.1453	0.681	0.273
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	2.3412	3.2411	0.51716	0.828	0.477
Mlx^{tm1.1(KOMP)Vlcg} -/-	7.3930	2.2708	1.6408	0.0782	0.00247
Mmaa^em1(IMPC)J/Mmjax -/-	-8.2500	2.5464	-1.7277	0.418	0.0835
Nars2^em1(IMPC)J -/+	-3.1693	2.1340	-0.80613	0.768	0.377
Nt5dc1^em1(IMPC)J -/-	-1.5406	3.1396	-0.51716	0.921	0.628
Nt5dc2^em1(IMPC)J/Mmjax -/-	-1.0703	2.7107	-0.35487	0.936	0.696
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	-3.8621	4.5400	-0.89695	0.780	0.406
Otogl^em1(IMPC)J -/-	1.1773	1.8996	0.24466	0.912	0.541
Ovch2^{tm1b(KOMP)Mbp} -/-	-2.6270	2.2291	-0.72152	0.679	0.245
Patj^em1(IMPC)J -/-	1.4453	2.7532	0.33252	0.917	0.606
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	6.5102	2.8526	1.5647	0.276	0.0306
Phkb^em1(IMPC)J/Mmjax -/+	1.2683	3.3156	0.26642	0.936	0.706
Plod2^em1(IMPC)J/Mmjax -/+	-0.21570	3.2449	-0.010532	0.956	0.948
Polr1c^em1(IMPC)J/Mmjax -/+	-3.9	3.6462	-0.92890	0.681	0.297
Prss2^{tm1.1(KOMP)Vlcg} -/-	3.1128	2.4759	0.66789	0.656	0.222
Ptprk^em1(IMPC)J/Mmjax -/-	-2.2735	2.9108	-0.64179	0.794	0.446
Pus1^em1(IMPC)J/Mmjax -/-	-5.1977	2.9408	-1.3784	0.418	0.0850
Rab34^{tm1b(EUCOMM)Hmgu} -/+	3.8040	2.3989	0.92890	0.498	0.122
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.93816	2.3279	-0.31034	0.936	0.689
Rbpms2^em1(IMPC)J -/-	-5.1521	2.1754	-1.3259	0.276	0.0328
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	2.3382	3.3998	0.49323	0.848	0.496
Rgs22^{tm1b(KOMP)Wtsi} -/-	2.8949	3.6442	0.59085	0.794	0.433
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-0.60696	3.9014	-0.22301	0.950	0.877
Rnf10^em1(IMPC)J -/-	9.5211	3.6672	1.9564	0.177	0.0165
Rtl10^em1(IMPC)J/Mmjax -/-	3.4565	2.4467	0.80613	0.530	0.171
Rxylt1^em1(IMPC)J/Mmjax -/+	2.3452	3.9875	0.54140	0.917	0.564
Sebox^em1(IMPC)J -/-	-0.53280	1.8739	-0.15864	0.943	0.779
Secisbp2l^em1(IMPC)J/Mmjax -/-	3.4283	3.8229	0.77731	0.768	0.377
Sel1l3^em1(IMPC)J/Mmjax -/-	-7.0485	5.1707	-1.4968	0.780	0.403
Serpina1f^em1(IMPC)J -/-	1.3543	3.0895	0.31034	0.936	0.665
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.30645	2.7708	-0.094931	0.956	0.913
Sh3rf3^em1(IMPC)J/Mmjax -/-	-0.23495	2.3915	-0.052685	0.956	0.923
Slc41a2^em1(IMPC)J/Mmjax -/-	-1.3309	2.9324	-0.44619	0.936	0.654
Slc9a9^em1(IMPC)J/Mmjax -/-	3.3743	2.9876	0.74913	0.681	0.268
Snx3^{tm1.1(KOMP)Vlcg} -/+	0.47406	2.4746	0.094931	0.950	0.849
Sp5^{tm1b(KOMP)Wtsi} -/-	10.229	3.4821	2.1247	0.118	0.00762
Spag17^{tm1b(KOMP)Wtsi} -/-	-0.25904	2.6769	-0.073791	0.956	0.924
Spink12^em1(IMPC)J -/-	-4.6191	2.2302	-1.1056	0.339	0.0484
Sprr1a^em1(IMPC)J -/-	3.2217	3.5487	0.69446	0.768	0.374
Srbd1^em1(IMPC)J/Mmjax -/+	3.0882	5.2909	0.64179	0.917	0.567
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	1.8791	3.8941	0.40011	0.921	0.633
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-0.94234	2.3109	-0.33252	0.936	0.686
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-9.7230	2.6704	-2.1247	0.0465	0.000788
Taco1^em1(IMPC)J/Mmjax -/+	0.4	2.3458	0.11611	0.950	0.867
Taco1^em1(IMPC)J/Mmjax -/-	-7.1309	2.9996	-1.5647	0.238	0.0243
Tat^em1(IMPC)J/Mmjax -/-	5.0617	2.8709	1.0676	0.423	0.0896
Tbc1d5^em1(IMPC)J -/-	6.3341	3.1009	1.4968	0.367	0.0560
Tctn3^em1(IMPC)J/Mmjax -/+	-0.59057	2.5963	-0.20146	0.943	0.823
Tecpr2^em1(IMPC)J/Mmjax -/-	0.30594	3.4167	0.073791	0.956	0.930
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	-0.50000	1.7078	-0.13735	0.943	0.772
Thsd7a^{tm1b(KOMP)Mbp} -/-	3.4793	2.2692	0.83563	0.505	0.137
Tnnc1^em1(IMPC)J/Mmjax -/+	3.7561	2.3619	0.89695	0.498	0.127
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	4.6246	3.0131	0.72152	0.681	0.135
Tpk1^em1(IMPC)J/Mmjax -/+	-1.1828	2.9787	-0.37739	0.936	0.695
Trip13^{tm1.1(KOMP)Vlcg} -/-	-0.23299	2.8104	-0.031601	0.956	0.934
Tspan13^em1Llp -/-	-2.2598	2.9544	-0.61612	0.794	0.451
Ttc38^em1Llp -/-	-3.3774	3.1343	-0.83563	0.681	0.298
Tuba8^em1(IMPC)J -/-	5.0289	4.0737	1.0310	0.660	0.229
Tubb2a^em1(IMPC)J -/-	1.2876	2.6213	0.28831	0.921	0.628
Ubap2^em1(IMPC)J/Mmjax -/-	0.64081	2.5142	0.15864	0.943	0.800
Utp4^em1(IMPC)J/Mmjax -/+	-4.5129	3.3494	-1.0310	0.580	0.192
Wdr81^em1(IMPC)J -/+	0.67105	2.6580	0.18001	0.943	0.803
Yeats2^em1(IMPC)J/Mmjax -/+	-0.45946	2.0083	-0.11611	0.943	0.823
Zc3h7a^em1(IMPC)J/Mmjax -/-	-4.8153	2.2778	-1.2306	0.328	0.0417
Zfp174^em1(IMPC)J -/-	2.1813	2.5140	0.46958	0.780	0.394
Zfp329^em1(IMPC)J -/-	-0.19396	2.5408	0.010532	0.956	0.940
Zfp422^em1(IMPC)J -/-	5.1771	3.1407	1.1056	0.477	0.109
Zfp706^em1(IMPC)J/Mmjax -/+	-1.1700	3.5289	-0.40011	0.943	0.744
Zfp827^em1(IMPC)J/Mmjax -/-	-7.2174	1.9707	-1.6408	0.118	0.00522

TRAIT CORRELATION PLOT

Correlate number of rears in 5 min bins, 20 min test with JaxKOMP-LAP trait: