MPD: JaxKOMP-LAP measure: center

JaxKOMP-LAP phenotype measure: center_distance

MPD and LIMS short name	center_distance center_distance_traveled
Phenotype description	distance traveled in center of arena, 20 min test [cm]
MPD and LIMS phenotype procedure	open field test open field View protocol
MPD measure ID, data type	101233 numeric data
Number of genotypes	118 genotypes completed with analytics available, both sexes
Age at testing	66-72wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-136.90	154.53	-0.96183	0.701	0.386
Abhd17b^em1(IMPC)J -/-	-151.08	103.35	-1.1056	0.344	0.159
Acadsb^em1(IMPC)J -/-	8.6395	66.391	-0.073791	0.937	0.898
Acy1^em1(IMPC)J -/-	-219.88	105.72	-1.4351	0.295	0.0479
Adad2^em1(IMPC)J -/-	139.19	90.411	0.49323	0.381	0.132
Adamts14^em1(IMPC)J -/-	223.48	449.89	0.92890	0.885	0.706
Adamtsl4^em1(IMPC)J -/-	-38.812	222.57	-0.35487	0.918	0.863
Afmid^em1Llp -/-	208.53	124.18	0.77731	0.344	0.105
Agbl1^em1(IMPC)J/Mmjax -/-	-8.2009	96.416	-0.15864	0.957	0.933
Alg8^em1(IMPC)J/Mmjax -/+	-244.08	86.730	-1.6408	0.344	0.106
Alg9^em1(IMPC)J/Mmjax -/+	225.31	142.30	0.96183	0.381	0.132
Anapc1^em1(IMPC)J/Mmjax -/+	264.70	252.74	1.1453	0.638	0.308
Apmap^em1(IMPC)J/Mmjax -/-	-91.291	62.399	-0.72152	0.424	0.155
AU040320^em1(IMPC)J -/-	199.84	201.91	0.69446	0.647	0.333
Brip1^em1(IMPC)J/Mmjax -/-	33.129	185.10	-0.031601	0.918	0.860
C1qc^em1(IMPC)J -/-	-172.67	89.317	-1.2306	0.295	0.0642
C7^em1(IMPC)J/Mmjax -/-	-140.93	102.15	-0.99584	0.486	0.189
Catsperz^{tm1.1(KOMP)Vlcg} -/-	28.633	123.59	-0.052685	0.908	0.818
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	523.78	168.26	1.9564	0.200	0.00346
Cdc42bpb^em1(IMPC)J -/+	-58.066	142.47	-0.44619	0.885	0.688
Cep135^em1(IMPC)J -/+	284.56	181.02	1.1868	0.381	0.132
Cgref1^em1(IMPC)J/Mmjax -/-	191.08	78.209	0.64179	0.273	0.0227
Chmp7^em1(IMPC)J/Mmjax -/+	-32.493	117.31	-0.31034	0.908	0.828
Cldn13^em1(IMPC)J -/-	-225.39	153.07	-1.4968	0.424	0.154
Clptm1l^em1(IMPC)J/Mmjax -/-	8.0203	214.80	-0.094931	0.971	0.971
Cr2^em1Llp -/-	81.873	109.58	0.18001	0.777	0.461
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	334.52	114.10	1.4968	0.200	0.00679
Dnajb2^em1(IMPC)J -/-	42.304	123.98	0.052685	0.889	0.736
Dnase1l2^em1(IMPC)J -/-	-122.02	114.57	-0.89695	0.626	0.297
Drc7^em1(IMPC)J -/-	121.97	140.29	0.37739	0.705	0.394
Dusp18^em1(IMPC)J/Mmjax -/-	-131.02	161.72	-0.86588	0.773	0.427
Eef1b2^em1(IMPC)J/Mmjax -/-	-142.81	202.49	-1.0310	0.789	0.489
Egfem1^em1(IMPC)J -/-	-90.160	127.68	-0.66789	0.803	0.553
Fbxo10^em1(IMPC)J/Mmjax -/-	-25.978	120.27	-0.24466	0.908	0.831
Fkbp6^{tm1b(KOMP)Wtsi} -/-	173.74	90.102	0.56595	0.295	0.0617
Frmpd1^em1(IMPC)J -/-	295.72	171.67	1.3259	0.525	0.227
Gm20498^em1(IMPC)J/Mmjax -/-	-289.96	130.93	-1.9564	0.273	0.0348
Gpr15^em1(IMPC)J -/-	-28.207	98.843	-0.28831	0.908	0.778
Gramd1c^{tm1b(KOMP)Wtsi} -/-	-43.531	132.71	-0.40011	0.889	0.746
Gramd3^em1(IMPC)J/Mmjax -/-	-25.297	145.33	-0.20146	0.946	0.878
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-176.42	94.119	-1.3259	0.295	0.0742
Igsf11^{tm1b(KOMP)Wtsi} -/-	-186.16	286.51	-1.3784	0.799	0.528
Kcnc3^em1(IMPC)J -/-	256.09	144.77	1.1056	0.321	0.0908
Kcnd3^em1(IMPC)J -/-	477.73	190.83	1.7277	0.273	0.0211
Klhl22^em1(IMPC)J/Mmjax -/-	-156.91	110.23	-1.1868	0.439	0.167
Krt80^em1(IMPC)J -/-	505.64	219.73	1.8302	0.273	0.0300
Kynu^em1(IMPC)J/Mmjax -/-	-54.798	211.37	-0.42304	0.908	0.798
Lpgat1^em1(IMPC)J/Mmjax -/-	-37.142	136.77	-0.33252	0.908	0.788
Lrp1^{tm1.1(KOMP)Wtsi} -/+	198.20	111.22	0.66789	0.321	0.0926
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	151.71	167.91	0.51716	0.693	0.376
Mlx^{tm1.1(KOMP)Vlcg} -/-	217.88	116.14	0.80613	0.295	0.0690
Mmaa^em1(IMPC)J/Mmjax -/-	-404.44	152.60	-2.3909	0.366	0.118
Nars2^em1(IMPC)J -/+	73.474	107.81	0.15864	0.840	0.619
Nt5dc1^em1(IMPC)J -/-	85.432	178.84	0.22301	0.855	0.637
Nt5dc2^em1(IMPC)J/Mmjax -/-	-230.39	117.98	-1.5647	0.295	0.0626
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	-88.476	157.41	-0.61612	0.816	0.581
Otogl^em1(IMPC)J -/-	-5.2509	124.20	-0.13735	0.971	0.967
Ovch2^{tm1b(KOMP)Mbp} -/-	-100.80	107.71	-0.77731	0.665	0.355
Patj^em1(IMPC)J -/-	316.62	165.42	1.4351	0.295	0.0717
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	236.27	87.663	0.99584	0.240	0.0122
Phkb^em1(IMPC)J/Mmjax -/+	199.97	150.29	0.72152	0.496	0.198
Plod2^em1(IMPC)J/Mmjax -/+	-64.180	185.11	-0.51716	0.889	0.732
Polr1c^em1(IMPC)J/Mmjax -/+	-60.140	160.90	-0.46958	0.885	0.712
Prss2^{tm1.1(KOMP)Vlcg} -/-	-96.176	76.558	-0.74913	0.525	0.224
Ptprk^em1(IMPC)J/Mmjax -/-	-113.61	88.590	-0.83563	0.522	0.216
Pus1^em1(IMPC)J/Mmjax -/-	-270.31	113.36	-1.7277	0.273	0.0221
Rab34^{tm1b(EUCOMM)Hmgu} -/+	175.33	94.849	0.59085	0.295	0.0735
Rad21l^{tm1b(KOMP)Wtsi} -/-	219.93	112.80	0.83563	0.295	0.0575
Rbpms2^em1(IMPC)J -/-	-275.58	144.64	-1.8302	0.295	0.0761
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	120.10	101.17	0.35487	0.552	0.243
Rgs22^{tm1b(KOMP)Wtsi} -/-	33.285	153.15	-0.010532	0.908	0.829
Rimklb^{tm1.1(KOMP)Vlcg} -/-	61.733	238.41	0.094931	0.908	0.797
Rnf10^em1(IMPC)J -/-	291.90	156.64	1.2768	0.295	0.0764
Rtl10^em1(IMPC)J/Mmjax -/-	440.65	161.90	1.6408	0.240	0.0119
Rxylt1^em1(IMPC)J/Mmjax -/+	-123.80	169.78	-0.92890	0.789	0.475
Sebox^em1(IMPC)J -/-	96.039	140.19	0.24466	0.789	0.500
Secisbp2l^em1(IMPC)J/Mmjax -/-	200.85	158.79	0.74913	0.522	0.217
Sel1l3^em1(IMPC)J/Mmjax -/-	-176.30	100.79	-1.2768	0.647	0.331
Serpina1f^em1(IMPC)J -/-	53.023	140.91	0.073791	0.885	0.710
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	128.95	112.51	0.42304	0.576	0.261
Sh3rf3^em1(IMPC)J/Mmjax -/-	104.68	109.66	0.28831	0.665	0.351
Slc41a2^em1(IMPC)J/Mmjax -/-	108.89	106.72	0.31034	0.646	0.317
Slc9a9^em1(IMPC)J/Mmjax -/-	124.43	109.07	0.40011	0.576	0.264
Snx3^{tm1.1(KOMP)Vlcg} -/+	288.63	97.063	1.2306	0.200	0.00546
Sp5^{tm1b(KOMP)Wtsi} -/-	254.48	138.90	1.0676	0.297	0.0805
Spag17^{tm1b(KOMP)Wtsi} -/-	154.96	84.182	0.54140	0.295	0.0775
Spink12^em1(IMPC)J -/-	-154.01	139.50	-1.1453	0.600	0.280
Sprr1a^em1(IMPC)J -/-	-105.87	170.89	-0.80613	0.803	0.542
Srbd1^em1(IMPC)J/Mmjax -/+	-20.636	129.29	-0.22301	0.922	0.875
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	-70.540	134.13	-0.56595	0.830	0.602
Svep1^{tm1b(EUCOMM)Hmgu} -/+	37.673	90.504	0.031601	0.885	0.680
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-67.179	113.20	-0.54140	0.803	0.556
Taco1^em1(IMPC)J/Mmjax -/+	187.48	83.202	0.61612	0.293	0.0422
Taco1^em1(IMPC)J/Mmjax -/-	-91.163	117.36	-0.69446	0.770	0.444
Tat^em1(IMPC)J/Mmjax -/-	220.97	118.72	0.86588	0.295	0.0745
Tbc1d5^em1(IMPC)J -/-	70.877	155.98	0.13735	0.869	0.655
Tctn3^em1(IMPC)J/Mmjax -/+	96.247	66.168	0.26642	0.439	0.164
Tecpr2^em1(IMPC)J/Mmjax -/-	349.12	153.24	1.5647	0.273	0.0345
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	220.45	96.072	0.89695	0.273	0.0312
Thsd7a^{tm1b(KOMP)Mbp} -/-	543.62	132.34	2.3909	0.0392	0.000333
Tnnc1^em1(IMPC)J/Mmjax -/+	82.292	120.35	0.20146	0.789	0.502
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	-38.146	113.75	-0.26642	0.908	0.740
Tpk1^em1(IMPC)J/Mmjax -/+	-339.28	142.62	-2.1247	0.273	0.0265
Trip13^{tm1.1(KOMP)Vlcg} -/-	128.53	137.58	0.44619	0.647	0.357
Tspan13^em1Llp -/-	-39.918	101.10	-0.37739	0.885	0.696
Ttc38^em1Llp -/-	134.55	189.77	0.46958	0.789	0.489
Tuba8^em1(IMPC)J -/-	529.12	238.25	2.1247	0.273	0.0370
Tubb2a^em1(IMPC)J -/-	299.65	133.60	1.3784	0.273	0.0358
Ubap2^em1(IMPC)J/Mmjax -/-	70.161	106.52	0.11611	0.789	0.515
Utp4^em1(IMPC)J/Mmjax -/+	-61.509	109.76	-0.49323	0.816	0.581
Wdr81^em1(IMPC)J -/+	-89.328	105.11	-0.64179	0.710	0.403
Yeats2^em1(IMPC)J/Mmjax -/+	119.27	224.60	0.33252	0.830	0.605
Zc3h7a^em1(IMPC)J/Mmjax -/-	5.7200	119.51	-0.11611	0.971	0.962
Zfp174^em1(IMPC)J -/-	37.275	113.11	0.010532	0.889	0.744
Zfp329^em1(IMPC)J -/-	-87.696	147.67	-0.59085	0.803	0.558
Zfp422^em1(IMPC)J -/-	-18.415	94.822	-0.18001	0.917	0.847
Zfp706^em1(IMPC)J/Mmjax -/+	252.37	128.84	1.0310	0.295	0.0658
Zfp827^em1(IMPC)J/Mmjax -/-	-147.08	213.56	-1.0676	0.789	0.508

TRAIT CORRELATION PLOT

Correlate distance traveled in center of arena, 20 min test with JaxKOMP-LAP trait: