MPD: JaxKOMP-LAP measure: pct

JaxKOMP-LAP phenotype measure: pct_fat

MPD and LIMS short name	pct_fat pct_fat
Phenotype description	percent fat, whole body scan, head excluded [%]
MPD and LIMS phenotype procedure	DXA body composition View protocol
MPD measure ID, data type	101135 numeric data
Number of genotypes	115 genotypes completed with analytics available, both sexes
Age at testing	72-78wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-9.2409	1.9276	-2.3815	0.116	0.0173
Abhd17b^em1(IMPC)J -/-	-1.2212	1.7315	-0.47059	0.759	0.489
Acadsb^em1(IMPC)J -/-	1.2755	1.4377	0.37603	0.712	0.384
Acy1^em1(IMPC)J -/-	3.1631	2.4423	0.91143	0.529	0.216
Adad2^em1(IMPC)J -/-	1.4719	1.2464	0.44659	0.542	0.245
Adamts14^em1(IMPC)J -/-	-1.9789	1.9880	-0.72979	0.759	0.501
Adamtsl4^em1(IMPC)J -/-	-0.32075	2.2229	-0.23998	0.928	0.887
Afmid^em1Llp -/-	1.6802	1.3081	0.49487	0.526	0.210
Agbl1^em1(IMPC)J/Mmjax -/-	8.6450	2.0239	2.1144	0.00919	0.000373
Alg8^em1(IMPC)J/Mmjax -/+	4.8570	1.3131	1.6284	0.258	0.0659
Alg9^em1(IMPC)J/Mmjax -/+	-1.4648	1.9544	-0.59518	0.759	0.464
Ano8^em1(IMPC)J -/-	-0.94910	2.1087	-0.42284	0.850	0.657
Apmap^em1(IMPC)J/Mmjax -/-	3.8698	1.2930	1.1297	0.0589	0.00614
Arap3^em1(IMPC)J -/-	-1.4595	1.2035	-0.56958	0.542	0.237
AU040320^em1(IMPC)J -/-	-3.3286	1.8797	-1.2156	0.302	0.0898
Brip1^em1(IMPC)J/Mmjax -/-	-3.0647	3.7188	-1.0897	0.737	0.425
C1qc^em1(IMPC)J -/-	1.3616	2.2588	0.39932	0.766	0.553
C7^em1(IMPC)J/Mmjax -/-	1.4003	2.0383	0.42284	0.759	0.500
Catsperz^{tm1.1(KOMP)Vlcg} -/-	1.0887	1.2961	0.30729	0.737	0.408
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-3.8145	1.5358	-1.4215	0.116	0.0181
Cdc42bpb^em1(IMPC)J -/+	2.3766	1.4922	0.72979	0.376	0.124
Cep135^em1(IMPC)J -/+	-3.5701	3.1049	-1.3645	0.569	0.262
Cgref1^em1(IMPC)J/Mmjax -/-	2.5372	1.7889	0.75829	0.466	0.170
Chmp7^em1(IMPC)J/Mmjax -/+	-2.8490	2.5262	-1.0513	0.759	0.462
Cldn13^em1(IMPC)J -/-	-4.5487	1.3427	-1.5519	0.0420	0.00292
Clptm1l^em1(IMPC)J/Mmjax -/-	2.3723	1.5687	0.70187	0.408	0.145
Cr2^em1Llp -/-	2.5372	1.5111	0.78742	0.332	0.104
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	-3.4239	1.7186	-1.2621	0.258	0.0595
Dnajb2^em1(IMPC)J -/-	-1.6072	1.5013	-0.62118	0.612	0.297
Dnase1l2^em1(IMPC)J -/-	-2.0202	1.3316	-0.78742	0.408	0.142
Drc7^em1(IMPC)J -/-	1.8723	1.5663	0.56958	0.542	0.245
Eef1b2^em1(IMPC)J/Mmjax -/-	-1.3395	2.4332	-0.54434	0.771	0.588
Egfem1^em1(IMPC)J -/-	0.54106	2.7579	0.086543	0.928	0.863
Fbxo10^em1(IMPC)J/Mmjax -/-	1.0776	1.7676	0.28472	0.766	0.550
Fkbp6^{tm1b(KOMP)Wtsi} -/-	0.30911	1.6235	0.043231	0.909	0.851
Frmpd1^em1(IMPC)J -/-	-2.2810	2.9555	-0.97899	0.759	0.521
Gm20498^em1(IMPC)J/Mmjax -/-	0.66435	1.2101	0.17374	0.771	0.590
Gpr15^em1(IMPC)J -/-	7.8240	1.6832	1.9454	0.00594	0.000155
Gramd3^em1(IMPC)J/Mmjax -/-	-2.3816	1.6860	-0.94467	0.521	0.170
Gsto1^em1(IMPC)J/Mmjax -/-	5.6294	2.4369	1.8186	0.178	0.0294
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-0.16887	1.9774	-0.21780	0.949	0.933
Hipk4^{tm1b(KOMP)Mbp} -/-	2.9941	1.6489	0.87917	0.289	0.0805
Hlcs^em1(IMPC)J/Mmjax -/+	-0.65276	1.7169	-0.35293	0.874	0.710
Idh3b^em1(IMPC)J/Mmjax -/-	0.64518	1.1227	0.15184	0.771	0.573
Igsf11^{tm1b(KOMP)Wtsi} -/-	4.2229	2.0541	1.3645	0.256	0.0519
Kcnc3^em1(IMPC)J -/-	1.2599	1.5249	0.35293	0.737	0.416
Klhl22^em1(IMPC)J/Mmjax -/-	3.6441	1.3900	1.0513	0.116	0.0152
Krt80^em1(IMPC)J -/-	-2.0071	1.2021	-0.75829	0.337	0.109
Lpgat1^em1(IMPC)J/Mmjax -/-	0.18947	1.6302	-0.15184	0.933	0.908
Lrp1^{tm1.1(KOMP)Wtsi} -/+	-0.87268	2.4423	-0.37603	0.874	0.726
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	-3.3228	1.6915	-1.1715	0.258	0.0629
Mfsd4b4^em1(IMPC)J/Mmjax -/-	0.12720	1.9656	-0.17374	0.957	0.949
Mgme1^em1(IMPC)J/Mmjax -/-	-7.8818	1.1188	-2.1144	0.000775	0.0000135
Mlx^{tm1.1(KOMP)Vlcg} -/-	3.3853	2.6024	0.94467	0.521	0.204
Mmaa^em1(IMPC)J/Mmjax -/-	-5.1736	9.2741	-1.6284	0.771	0.589
Nars2^em1(IMPC)J -/+	0.95713	1.3311	0.23998	0.766	0.547
Nt5dc2^em1(IMPC)J/Mmjax -/-	-2.1590	1.0703	-0.91143	0.258	0.0648
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	3.8801	2.5091	1.1715	0.408	0.143
Ofcc1^em1(IMPC)J -/-	4.0711	2.1327	1.2621	0.258	0.0674
Otogl^em1(IMPC)J -/-	1.8038	1.2908	0.54434	0.466	0.174
Ovch2^{tm1b(KOMP)Mbp} -/-	3.9733	1.4239	1.3116	0.0523	0.00857
Patj^em1(IMPC)J -/-	-2.0807	3.5762	-0.81724	0.771	0.568
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	0.56465	1.7313	-0.086543	0.928	0.748
Phkb^em1(IMPC)J/Mmjax -/+	-1.7187	2.7763	-0.64760	0.766	0.543
Polr1c^em1(IMPC)J/Mmjax -/+	-5.6073	1.2673	-1.8186	0.0403	0.000166
Prss2^{tm1.1(KOMP)Vlcg} -/-	1.1938	1.3355	0.67449	0.292	0.380
Ptprk^em1(IMPC)J/Mmjax -/-	0.67758	1.9589	0.19572	0.874	0.734
Pus1^em1(IMPC)J/Mmjax -/-	0.93367	1.4218	0.21780	0.759	0.518
Rab34^{tm1b(EUCOMM)Hmgu} -/+	0.33316	0.98893	-0.064872	0.874	0.739
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.94807	1.4040	-0.39932	0.759	0.505
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	4.0336	1.2873	1.2156	0.0471	0.00368
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.10675	2.0700	-0.10826	0.928	0.959
Rimklb^{tm1.1(KOMP)Vlcg} -/-	1.9800	2.4200	0.59518	0.737	0.423
Rnf10^em1(IMPC)J -/-	0.25932	1.6095	-0.13002	0.928	0.873
Sebox^em1(IMPC)J -/-	-2.1349	1.8772	-0.84780	0.569	0.267
Secisbp2l^em1(IMPC)J/Mmjax -/-	-6.8607	1.7356	-1.9454	0.00919	0.000400
Sel1l3^em1(IMPC)J/Mmjax -/-	4.7432	2.8537	1.4835	0.672	0.345
Serpina1f^em1(IMPC)J -/-	-2.1381	2.0954	-0.87917	0.653	0.324
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	0.43303	2.7663	0.021611	0.928	0.877
Sh3rf3^em1(IMPC)J/Mmjax -/-	0.52548	1.2926	0.064872	0.869	0.688
Slc41a2^em1(IMPC)J/Mmjax -/-	0.010551	1.9989	-0.19572	0.996	0.996
Slc9a9^em1(IMPC)J/Mmjax -/-	-1.9064	2.1159	-0.70187	0.710	0.377
Snx3^{tm1.1(KOMP)Vlcg} -/+	-1.0667	1.4564	-0.44659	0.759	0.470
Sp5^{tm1b(KOMP)Wtsi} -/-	-0.55509	1.4541	-0.33003	0.874	0.707
Spag17^{tm1b(KOMP)Wtsi} -/-	0.61262	1.8472	0.13002	0.874	0.743
Spink12^em1(IMPC)J -/-	4.4376	1.6733	1.4215	0.115	0.0140
Sprr1a^em1(IMPC)J -/-	1.7068	1.5931	0.51945	0.612	0.298
Srbd1^em1(IMPC)J/Mmjax -/+	-0.54150	1.7162	-0.30729	0.917	0.805
St6galnac3^em1(IMPC)J -/-	5.3456	2.5495	1.7158	0.256	0.0534
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	3.5740	1.4335	1.0145	0.116	0.0180
Svep1^{tm1b(EUCOMM)Hmgu} -/+	0.96558	1.3724	0.26228	0.759	0.490
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	-1.3334	1.3889	-0.51945	0.672	0.344
Taco1^em1(IMPC)J/Mmjax -/-	0.63148	1.6534	-0.28472	0.928	0.705
Tat^em1(IMPC)J/Mmjax -/-	-1.2012	2.7828	-0.49487	0.852	0.670
Tbc1d5^em1(IMPC)J -/-	-1.7323	2.2722	-0.67449	0.759	0.457
Tctn3^em1(IMPC)J/Mmjax -/+	3.4138	0.78001	0.97899	0.0121	0.000633
Tecpr2^em1(IMPC)J/Mmjax -/-	-3.5003	1.8293	-1.3116	0.270	0.0727
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	3.8093	1.2215	1.0897	0.0523	0.00500
Thsd7a^{tm1b(KOMP)Mbp} -/-	-0.32458	1.3002	-0.26228	0.917	0.805
Tnnc1^em1(IMPC)J/Mmjax -/+	0.35949	1.6695	0.0	0.928	0.831
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	3.3867	2.3826	0.84780	0.542	0.165
Trf^em1(IMPC)J/Mmjax -/+	0.34624	1.6131	-0.021611	0.928	0.832
Trip13^{tm1.1(KOMP)Vlcg} -/-	4.4359	1.9802	1.5519	0.207	0.0335
Tspan13^em1Llp -/-	0.54146	1.6490	0.10826	0.874	0.745
Ttc38^em1Llp -/-	10.382	1.6205	2.3815	0.000345	0.00000300
Ubap2^em1(IMPC)J/Mmjax -/-	1.5779	1.9626	0.47059	0.737	0.429
Wdr81^em1(IMPC)J -/+	-2.5958	1.4826	-1.0145	0.302	0.0918
Yeats2^em1(IMPC)J/Mmjax -/+	-0.18418	1.9771	-0.043231	0.928	0.927
Zc3h7a^em1(IMPC)J/Mmjax -/-	2.8564	1.3210	0.81724	0.219	0.0404
Zfp174^em1(IMPC)J -/-	2.0281	2.2046	0.62118	0.703	0.367
Zfp329^em1(IMPC)J -/-	2.2535	1.1281	0.64760	0.258	0.0577
Zfp422^em1(IMPC)J -/-	-3.1537	1.4709	-1.1297	0.219	0.0419
Zfp706^em1(IMPC)J/Mmjax -/+	1.1623	1.7852	0.33003	0.759	0.522
Zfp827^em1(IMPC)J/Mmjax -/+	-3.9475	3.1387	-1.4835	0.542	0.240
Zfp827^em1(IMPC)J/Mmjax -/-	-5.3991	1.7116	-1.7158	0.103	0.0117

TRAIT CORRELATION PLOT

Correlate percent fat, whole body scan, head excluded with JaxKOMP-LAP trait: