MPD: JaxKOMP-LAP measure: TTM

JaxKOMP-LAP phenotype measure: TTM

MPD and LIMS short name	TTM ttm
Phenotype description	total tissue mass, whole body scan, head excluded [g]
MPD and LIMS phenotype procedure	DXA body composition View protocol
MPD measure ID, data type	101130 numeric data
Number of genotypes	115 genotypes completed with analytics available, both sexes
Age at testing	72-78wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

Download Plot

Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-0.072800	0.66226	-0.26228	0.990	0.919
Abhd17b^em1(IMPC)J -/-	1.0491	0.54059	0.97899	0.365	0.0673
Acadsb^em1(IMPC)J -/-	0.50473	0.40228	0.44659	0.671	0.222
Acy1^em1(IMPC)J -/-	6.5771	2.3489	2.3815	0.272	0.0142
Adad2^em1(IMPC)J -/-	0.15406	0.38029	0.043231	0.942	0.688
Adamts14^em1(IMPC)J -/-	-0.65737	0.63645	-0.91143	0.852	0.490
Adamtsl4^em1(IMPC)J -/-	0.56167	0.61209	0.54434	0.771	0.369
Afmid^em1Llp -/-	1.0372	0.52646	0.94467	0.365	0.0596
Agbl1^em1(IMPC)J/Mmjax -/-	2.1020	0.93625	1.7158	0.298	0.0362
Alg8^em1(IMPC)J/Mmjax -/+	1.6643	1.2913	1.5519	0.771	0.326
Alg9^em1(IMPC)J/Mmjax -/+	-1.6513	0.96616	-1.6284	0.454	0.106
Ano8^em1(IMPC)J -/-	1.2523	0.33839	1.1715	0.0814	0.00142
Apmap^em1(IMPC)J/Mmjax -/-	-0.94090	0.42167	-1.2156	0.298	0.0349
Arap3^em1(IMPC)J -/-	0.65265	0.71332	0.67449	0.771	0.369
AU040320^em1(IMPC)J -/-	1.1643	1.3258	1.0897	0.788	0.389
Brip1^em1(IMPC)J/Mmjax -/-	-5.3064	2.0266	-2.3815	0.272	0.0213
C1qc^em1(IMPC)J -/-	0.033158	0.42682	-0.086543	0.990	0.939
C7^em1(IMPC)J/Mmjax -/-	1.6265	0.66982	1.4215	0.284	0.0247
Catsperz^{tm1.1(KOMP)Vlcg} -/-	-0.50533	0.38507	-0.81724	0.658	0.200
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-1.0002	0.66934	-1.2621	0.593	0.144
Cdc42bpb^em1(IMPC)J -/+	0.41626	0.62388	0.35293	0.852	0.511
Cep135^em1(IMPC)J -/+	-3.1169	2.2112	-2.1144	0.600	0.172
Cgref1^em1(IMPC)J/Mmjax -/-	0.12857	0.69611	0.021611	0.964	0.855
Chmp7^em1(IMPC)J/Mmjax -/+	0.49274	0.67529	0.42284	0.889	0.599
Cldn13^em1(IMPC)J -/-	-0.34120	0.35253	-0.59518	0.771	0.345
Clptm1l^em1(IMPC)J/Mmjax -/-	-0.79546	0.60962	-1.0897	0.658	0.206
Cr2^em1Llp -/-	0.47691	1.0246	0.39932	0.927	0.645
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	-1.3349	0.93863	-1.4215	0.600	0.170
Dnajb2^em1(IMPC)J -/-	0.88516	0.88944	0.84780	0.771	0.331
Dnase1l2^em1(IMPC)J -/-	0.47651	0.56932	0.37603	0.801	0.411
Drc7^em1(IMPC)J -/-	0.59400	0.58735	0.62118	0.771	0.323
Eef1b2^em1(IMPC)J/Mmjax -/-	0.40774	0.93546	0.33003	0.942	0.668
Egfem1^em1(IMPC)J -/-	0.097182	0.44722	-0.021611	0.964	0.848
Fbxo10^em1(IMPC)J/Mmjax -/-	-3.0946	1.6052	-1.9454	0.365	0.0698
Fkbp6^{tm1b(KOMP)Wtsi} -/-	-0.20659	0.67465	-0.17374	0.997	0.762
Frmpd1^em1(IMPC)J -/-	0.35165	0.57524	0.28472	0.889	0.603
Gm20498^em1(IMPC)J/Mmjax -/-	-0.28808	0.44887	-0.51945	0.869	0.529
Gpr15^em1(IMPC)J -/-	2.5596	1.0227	2.1144	0.272	0.0211
Gramd3^em1(IMPC)J/Mmjax -/-	-0.15900	0.50656	-0.70187	0.852	0.756
Gsto1^em1(IMPC)J/Mmjax -/-	0.0028861	0.52878	-0.15184	0.997	0.996
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-0.26944	1.1061	-0.49487	0.964	0.810
Hipk4^{tm1b(KOMP)Mbp} -/-	-0.014481	0.74064	-0.19572	0.997	0.985
Hlcs^em1(IMPC)J/Mmjax -/+	-1.5795	0.58657	-1.4835	0.272	0.0184
Idh3b^em1(IMPC)J/Mmjax -/-	0.88019	0.62598	0.81724	0.601	0.178
Igsf11^{tm1b(KOMP)Wtsi} -/-	0.16249	0.63318	0.064872	0.964	0.800
Kcnc3^em1(IMPC)J -/-	1.3564	0.53310	1.2621	0.272	0.0172
Klhl22^em1(IMPC)J/Mmjax -/-	0.56539	0.39735	0.59518	0.600	0.168
Krt80^em1(IMPC)J -/-	-0.083602	0.29518	-0.28472	0.964	0.780
Lpgat1^em1(IMPC)J/Mmjax -/-	0.22129	0.38959	0.17374	0.889	0.575
Lrp1^{tm1.1(KOMP)Wtsi} -/+	1.7995	2.0692	1.6284	0.788	0.397
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	-0.63760	0.66249	-0.84780	0.771	0.347
Mfsd4b4^em1(IMPC)J/Mmjax -/-	-0.096729	0.59083	-0.30729	0.964	0.872
Mgme1^em1(IMPC)J/Mmjax -/-	-1.9759	1.0379	-1.8186	0.373	0.0812
Mlx^{tm1.1(KOMP)Vlcg} -/-	-0.10575	0.57958	-0.33003	0.964	0.857
Mmaa^em1(IMPC)J/Mmjax -/-	-1.0539	1.4987	-1.3116	0.852	0.498
Nars2^em1(IMPC)J -/+	0.30766	0.97232	0.21780	0.964	0.782
Nt5dc2^em1(IMPC)J/Mmjax -/-	0.81427	0.71768	0.78742	0.769	0.277
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	1.2408	0.64645	1.1297	0.371	0.0742
Ofcc1^em1(IMPC)J -/-	2.2336	1.0693	1.8186	0.358	0.0467
Otogl^em1(IMPC)J -/-	1.2649	0.39675	1.2156	0.108	0.00371
Ovch2^{tm1b(KOMP)Mbp} -/-	0.59582	0.47990	0.75829	0.365	0.223
Patj^em1(IMPC)J -/-	-0.40919	1.4710	-0.67449	0.964	0.784
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	0.96745	0.71617	-0.44659	0.990	0.191
Phkb^em1(IMPC)J/Mmjax -/+	-1.6095	1.4042	-1.5519	0.761	0.265
Polr1c^em1(IMPC)J/Mmjax -/+	0.69752	0.54392	-0.78742	0.964	0.211
Prss2^{tm1.1(KOMP)Vlcg} -/-	0.51195	0.59412	1.4835	0.373	0.397
Ptprk^em1(IMPC)J/Mmjax -/-	-0.36993	0.48018	-0.62118	0.852	0.452
Pus1^em1(IMPC)J/Mmjax -/-	-0.64092	0.67796	-0.87917	0.771	0.354
Rab34^{tm1b(EUCOMM)Hmgu} -/+	0.56520	0.52204	0.56958	0.771	0.288
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.33570	0.26714	-0.56958	0.671	0.219
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	0.91151	0.47001	0.87917	0.365	0.0613
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.065800	0.70457	0.23998	0.889	0.927
Rimklb^{tm1.1(KOMP)Vlcg} -/-	0.11434	1.2795	0.0	0.990	0.930
Rnf10^em1(IMPC)J -/-	-0.37866	0.92604	-0.64760	0.942	0.686
Sebox^em1(IMPC)J -/-	-1.7305	0.90249	-1.7158	0.365	0.0677
Secisbp2l^em1(IMPC)J/Mmjax -/-	-1.2258	0.56006	-1.3645	0.298	0.0360
Sel1l3^em1(IMPC)J/Mmjax -/-	0.23449	0.84890	0.19572	0.964	0.828
Serpina1f^em1(IMPC)J -/-	-0.16702	0.53184	-0.39932	0.964	0.758
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.77997	1.0630	-1.0513	0.852	0.471
Sh3rf3^em1(IMPC)J/Mmjax -/-	-0.31217	0.44648	-0.54434	0.852	0.490
Slc41a2^em1(IMPC)J/Mmjax -/-	-0.67067	0.53020	-0.94467	0.771	0.333
Slc9a9^em1(IMPC)J/Mmjax -/-	-0.68514	0.66534	-1.0145	0.771	0.313
Snx3^{tm1.1(KOMP)Vlcg} -/+	-0.44105	0.71504	-0.75829	0.869	0.543
Sp5^{tm1b(KOMP)Wtsi} -/-	-0.44051	0.39753	-0.72979	0.769	0.281
Spag17^{tm1b(KOMP)Wtsi} -/-	0.67703	0.54722	0.70187	0.677	0.230
Spink12^em1(IMPC)J -/-	-0.26365	0.38908	-0.47059	0.852	0.504
Sprr1a^em1(IMPC)J -/-	0.54584	0.38194	0.51945	0.600	0.170
Srbd1^em1(IMPC)J/Mmjax -/+	-0.85075	0.43190	-1.1297	0.771	0.299
St6galnac3^em1(IMPC)J -/-	-0.15180	0.36285	-0.37603	0.942	0.682
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	0.96137	0.48928	0.91143	0.365	0.0582
Svep1^{tm1b(EUCOMM)Hmgu} -/+	0.18692	0.27516	0.13002	0.852	0.505
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	0.015167	0.46791	-0.10826	0.997	0.974
Taco1^em1(IMPC)J/Mmjax -/-	-0.37865	0.63134	-0.97899	0.891	0.553
Tat^em1(IMPC)J/Mmjax -/-	-0.14883	0.56924	0.64760	0.869	0.796
Tbc1d5^em1(IMPC)J -/-	-0.87976	0.99838	-1.1715	0.788	0.391
Tctn3^em1(IMPC)J/Mmjax -/+	2.4399	0.38980	1.9454	0.00241	0.0000209
Tecpr2^em1(IMPC)J/Mmjax -/-	0.34793	0.59068	0.26228	0.888	0.564
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	-0.17780	0.50634	-0.42284	0.964	0.729
Thsd7a^{tm1b(KOMP)Mbp} -/-	0.048938	0.28440	-0.064872	0.964	0.865
Tnnc1^em1(IMPC)J/Mmjax -/+	-0.14159	0.59126	-0.35293	0.964	0.813
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	0.087904	0.65548	-0.13002	0.997	0.894
Trf^em1(IMPC)J/Mmjax -/+	-0.056090	0.54389	-0.21780	0.990	0.919
Trip13^{tm1.1(KOMP)Vlcg} -/-	0.17663	0.98059	-0.043231	0.997	0.858
Tspan13^em1Llp -/-	0.69861	0.41845	0.72979	0.454	0.107
Ttc38^em1Llp -/-	1.4712	1.0265	1.3116	0.600	0.167
Ubap2^em1(IMPC)J/Mmjax -/-	0.18343	0.98986	0.10826	0.964	0.855
Wdr81^em1(IMPC)J -/+	0.16382	0.61975	0.086543	0.964	0.794
Yeats2^em1(IMPC)J/Mmjax -/+	0.67232	0.49807	0.30729	0.964	0.191
Zc3h7a^em1(IMPC)J/Mmjax -/-	0.51190	0.55009	0.47059	0.771	0.361
Zfp174^em1(IMPC)J -/-	1.0515	0.47071	1.0145	0.298	0.0351
Zfp329^em1(IMPC)J -/-	1.0833	0.33582	1.0513	0.108	0.00374
Zfp422^em1(IMPC)J -/-	-0.070711	0.38100	-0.23998	0.964	0.854
Zfp706^em1(IMPC)J/Mmjax -/+	1.5522	1.8982	1.3645	0.809	0.422
Zfp827^em1(IMPC)J/Mmjax -/+	0.19229	0.84078	0.15184	0.964	0.824
Zfp827^em1(IMPC)J/Mmjax -/-	0.54162	0.97739	0.49487	0.889	0.595

TRAIT CORRELATION PLOT

Correlate total tissue mass, whole body scan, head excluded with JaxKOMP-LAP trait: