MPD: JaxKOMP-LAP measure: t

JaxKOMP-LAP phenotype measure: t_area

MPD and LIMS short name	t_area t_area
Phenotype description	tissue area [cm²]
MPD and LIMS phenotype procedure	DXA body composition View protocol
MPD measure ID, data type	101129 numeric data
Number of genotypes	115 genotypes completed with analytics available, both sexes
Age at testing	72-78wks Late Adult Phenotyping study LAP

Ontology mappings

Data points below are the computed genotype effect size for each KOMP genotype vs. C57BL6/NJ controls.

MULTIPLE GENOTYPE PROFILE PLOT

Dimensions Width: × Height: px

Plot Options Alphabetical Order Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

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Genotype	Genotype Effect	Genotype Effect SE	Genotype Effect RankZ	Adjusted p-value	Unadjusted p-value

Abcd3^em1(IMPC)J -/-	-2.0846	1.4718	-1.9454	0.658	0.252
Abhd17b^em1(IMPC)J -/-	-0.085398	0.42072	0.064872	0.961	0.841
Acadsb^em1(IMPC)J -/-	0.38715	0.21820	0.72979	0.392	0.0887
Acy1^em1(IMPC)J -/-	3.2009	1.0141	2.3815	0.0895	0.00700
Adad2^em1(IMPC)J -/-	-0.22547	0.28132	-0.33003	0.735	0.428
Adamts14^em1(IMPC)J -/-	-0.21229	0.57305	-0.26228	0.933	0.774
Adamtsl4^em1(IMPC)J -/-	-0.27684	0.37882	-0.44659	0.757	0.473
Afmid^em1Llp -/-	0.78680	0.35422	1.2621	0.270	0.0353
Agbl1^em1(IMPC)J/Mmjax -/-	1.0730	0.70417	1.3116	0.532	0.143
Alg8^em1(IMPC)J/Mmjax -/+	1.3241	0.92380	1.4835	0.670	0.288
Alg9^em1(IMPC)J/Mmjax -/+	-0.49560	0.41020	-0.70187	0.658	0.244
Ano8^em1(IMPC)J -/-	0.34387	0.41567	0.59518	0.733	0.418
Apmap^em1(IMPC)J/Mmjax -/-	0.030118	0.22374	0.21780	0.961	0.894
Arap3^em1(IMPC)J -/-	-0.045554	0.47626	0.086543	0.969	0.925
AU040320^em1(IMPC)J -/-	0.48192	0.68219	0.81724	0.757	0.487
Brip1^em1(IMPC)J/Mmjax -/-	-2.6139	1.2635	-2.1144	0.312	0.0591
C1qc^em1(IMPC)J -/-	0.26936	0.37719	0.47059	0.757	0.482
C7^em1(IMPC)J/Mmjax -/-	1.4617	0.59039	1.6284	0.214	0.0224
Catsperz^{tm1.1(KOMP)Vlcg} -/-	-0.19242	0.36482	-0.21780	0.845	0.602
Ccdc28a^{tm3b(EUCOMM)Wtsi}/2J -/-	-0.74474	0.47341	-0.91143	0.496	0.125
Cdc42bpb^em1(IMPC)J -/+	0.035916	0.38501	0.23998	0.969	0.926
Cep135^em1(IMPC)J -/+	-1.7636	1.3954	-1.5519	0.626	0.219
Cgref1^em1(IMPC)J/Mmjax -/-	0.30612	0.32199	0.54434	0.683	0.352
Chmp7^em1(IMPC)J/Mmjax -/+	-0.27358	0.49168	-0.42284	0.895	0.677
Cldn13^em1(IMPC)J -/-	-0.39038	0.33056	-0.54434	0.658	0.251
Clptm1l^em1(IMPC)J/Mmjax -/-	-0.85590	0.56979	-1.0513	0.532	0.148
Cr2^em1Llp -/-	0.63275	0.59604	1.0513	0.670	0.297
Diaph3^{tm1b(KOMP)Mbp}/2J -/+	-0.66774	0.47478	-0.87917	0.589	0.174
Dnajb2^em1(IMPC)J -/-	0.38165	0.43211	0.70187	0.707	0.387
Dnase1l2^em1(IMPC)J -/-	0.019556	0.38919	0.19572	0.986	0.960
Drc7^em1(IMPC)J -/-	0.10357	0.36547	0.30729	0.933	0.780
Eef1b2^em1(IMPC)J/Mmjax -/-	-0.10589	0.63775	-0.043231	0.961	0.870
Egfem1^em1(IMPC)J -/-	-0.49241	0.37715	-0.67449	0.670	0.322
Fbxo10^em1(IMPC)J/Mmjax -/-	-1.9457	0.83382	-1.8186	0.258	0.0314
Fkbp6^{tm1b(KOMP)Wtsi} -/-	-0.27257	0.39613	-0.17374	0.895	0.498
Frmpd1^em1(IMPC)J -/-	0.58100	0.79982	0.97899	0.811	0.543
Gm20498^em1(IMPC)J/Mmjax -/-	-1.3141	0.35993	-1.2621	0.0688	0.00183
Gpr15^em1(IMPC)J -/-	1.4802	0.46373	1.7158	0.0752	0.00458
Gramd3^em1(IMPC)J/Mmjax -/-	-0.34901	0.42733	-0.59518	0.670	0.422
Gsto1^em1(IMPC)J/Mmjax -/-	0.77028	0.54970	1.2156	0.589	0.173
Gtpbp10^{tm1b(KOMP)Mbp} -/-	-0.19075	0.69802	-0.19572	0.933	0.787
Hipk4^{tm1b(KOMP)Mbp} -/-	-0.66442	0.65386	-0.84780	0.670	0.319
Hlcs^em1(IMPC)J/Mmjax -/+	-1.8470	0.22926	-1.6284	0.000238	0.00000207
Idh3b^em1(IMPC)J/Mmjax -/-	0.22327	0.51603	0.42284	0.895	0.671
Igsf11^{tm1b(KOMP)Wtsi} -/-	0.36944	0.34509	0.62118	0.670	0.296
Kcnc3^em1(IMPC)J -/-	0.56194	0.31336	0.91143	0.392	0.0846
Klhl22^em1(IMPC)J/Mmjax -/-	-0.32187	0.42077	-0.47059	0.757	0.452
Krt80^em1(IMPC)J -/-	-0.21086	0.20868	-0.23998	0.670	0.323
Lpgat1^em1(IMPC)J/Mmjax -/-	-0.13364	0.36118	-0.10826	0.913	0.715
Lrp1^{tm1.1(KOMP)Wtsi} -/+	0.17282	0.98061	0.37603	0.961	0.862
Mapk15^{tm1b(EUCOMM)Hmgu} -/-	-0.23025	0.40323	-0.35293	0.825	0.574
Mfsd4b4^em1(IMPC)J/Mmjax -/-	-1.6118	0.48855	-1.4835	0.0688	0.00358
Mgme1^em1(IMPC)J/Mmjax -/-	-1.9175	0.69080	-1.7158	0.175	0.0168
Mlx^{tm1.1(KOMP)Vlcg} -/-	0.55413	0.59204	0.84780	0.683	0.357
Mmaa^em1(IMPC)J/Mmjax -/-	-3.2325	1.6211	-2.3815	0.371	0.0741
Nars2^em1(IMPC)J -/+	0.44624	1.0015	0.75829	0.906	0.700
Nt5dc2^em1(IMPC)J/Mmjax -/-	1.0907	0.49211	1.3645	0.292	0.0451
Nup37^{tm1.1(KOMP)Vlcg}/2J -/-	1.7475	0.54935	2.1144	0.0891	0.00620
Ofcc1^em1(IMPC)J -/-	0.44762	0.54689	0.78742	0.733	0.421
Otogl^em1(IMPC)J -/-	0.76558	0.27537	1.1715	0.115	0.00996
Ovch2^{tm1b(KOMP)Mbp} -/-	0.49779	0.27630	0.94467	0.302	0.0805
Patj^em1(IMPC)J -/-	-1.0917	0.66826	-1.2156	0.496	0.121
Pcgf1^{tm1.1(KOMP)Vlcg} -/+	0.61265	0.51786	0.10826	0.997	0.250
Phkb^em1(IMPC)J/Mmjax -/+	-0.47411	0.70910	-0.62118	0.784	0.511
Polr1c^em1(IMPC)J/Mmjax -/+	0.32145	0.23354	0.13002	0.997	0.181
Prss2^{tm1.1(KOMP)Vlcg} -/-	-0.0034990	0.37375	0.49487	0.827	0.993
Ptprk^em1(IMPC)J/Mmjax -/-	0.37980	0.39499	0.67449	0.683	0.351
Pus1^em1(IMPC)J/Mmjax -/-	-0.80388	0.24903	-0.97899	0.0688	0.00359
Rab34^{tm1b(EUCOMM)Hmgu} -/+	0.042415	0.37088	0.26228	0.969	0.910
Rad21l^{tm1b(KOMP)Wtsi} -/-	-0.24068	0.23955	-0.37603	0.670	0.323
Rec8^{tm1b(KOMP)Wtsi}/2J -/-	0.37150	0.23218	0.64760	0.496	0.119
Rgs22^{tm1b(KOMP)Wtsi} -/-	-0.40614	0.31128	-0.30729	0.811	0.208
Rimklb^{tm1.1(KOMP)Vlcg} -/-	-0.76589	0.68477	-0.94467	0.670	0.277
Rnf10^em1(IMPC)J -/-	-0.25831	0.52956	-0.39932	0.873	0.630
Sebox^em1(IMPC)J -/-	-0.65831	0.47582	-0.81724	0.591	0.180
Secisbp2l^em1(IMPC)J/Mmjax -/-	-1.4518	0.45918	-1.3116	0.0688	0.00342
Sel1l3^em1(IMPC)J/Mmjax -/-	0.55670	0.28943	0.87917	0.670	0.305
Serpina1f^em1(IMPC)J -/-	0.20420	0.61568	0.39932	0.913	0.745
Setd6^{tm1.1(KOMP)Mbp}/3J -/-	-0.32520	0.56319	-0.49487	0.825	0.569
Sh3rf3^em1(IMPC)J/Mmjax -/-	0.016304	0.30971	0.17374	0.986	0.958
Slc41a2^em1(IMPC)J/Mmjax -/-	1.4862	0.76645	1.9454	0.614	0.192
Slc9a9^em1(IMPC)J/Mmjax -/-	0.062103	0.45496	0.28472	0.961	0.893
Snx3^{tm1.1(KOMP)Vlcg} -/+	-0.61263	0.49104	-0.78742	0.626	0.223
Sp5^{tm1b(KOMP)Wtsi} -/-	-0.37580	0.42129	-0.51945	0.707	0.383
Spag17^{tm1b(KOMP)Wtsi} -/-	-0.45186	0.48519	-0.56958	0.683	0.362
Spink12^em1(IMPC)J -/-	0.33417	0.26534	0.56958	0.626	0.220
Sprr1a^em1(IMPC)J -/-	-0.091455	0.37089	0.043231	0.948	0.808
Srbd1^em1(IMPC)J/Mmjax -/+	-1.4803	0.88147	-1.3645	0.683	0.342
St6galnac3^em1(IMPC)J -/-	0.64771	0.35526	1.0897	0.392	0.0883
Stag3^{tm1e.1(KOMP)Wtsi}/2J -/-	0.75660	0.36954	1.1297	0.296	0.0489
Svep1^{tm1b(EUCOMM)Hmgu} -/+	-0.092628	0.50013	0.021611	0.961	0.855
Syce1^{tm1b(KOMP)Wtsi}/2J -/-	0.0048051	0.32911	0.15184	0.997	0.988
Taco1^em1(IMPC)J/Mmjax -/-	-0.51523	0.35573	-0.64760	0.757	0.158
Tat^em1(IMPC)J/Mmjax -/-	-1.8105	0.59102	-1.4215	0.292	0.00550
Tbc1d5^em1(IMPC)J -/-	-1.0171	0.76148	-1.1297	0.623	0.200
Tctn3^em1(IMPC)J/Mmjax -/+	1.3412	0.59248	1.5519	0.288	0.0400
Tecpr2^em1(IMPC)J/Mmjax -/-	0.14651	0.37556	0.33003	0.906	0.701
Tex2^{tm1.1(KOMP)Vlcg}/2J -/-	0.27405	0.24400	0.51945	0.670	0.273
Thsd7a^{tm1b(KOMP)Mbp} -/-	-0.54249	0.27505	-0.72979	0.312	0.0597
Tnnc1^em1(IMPC)J/Mmjax -/+	-0.21527	0.36516	-0.28472	0.825	0.560
Tpgs2^{tm1.1(KOMP)Vlcg} -/-	-0.86263	1.0090	-1.1715	0.670	0.399
Trf^em1(IMPC)J/Mmjax -/+	-0.15871	0.44832	-0.15184	0.913	0.727
Trip13^{tm1.1(KOMP)Vlcg} -/-	-0.53813	0.57187	-0.75829	0.733	0.355
Tspan13^em1Llp -/-	0.15358	0.32372	0.35293	0.875	0.639
Ttc38^em1Llp -/-	1.0986	0.47088	1.4215	0.258	0.0302
Ubap2^em1(IMPC)J/Mmjax -/-	-0.80767	0.62587	-1.0145	0.626	0.209
Wdr81^em1(IMPC)J -/+	-0.096258	0.41572	0.0	0.951	0.819
Yeats2^em1(IMPC)J/Mmjax -/+	-0.20357	0.60464	-0.021611	0.961	0.740
Zc3h7a^em1(IMPC)J/Mmjax -/-	-0.12008	0.36663	-0.086543	0.913	0.746
Zfp174^em1(IMPC)J -/-	1.4807	0.40741	1.8186	0.0688	0.00132
Zfp329^em1(IMPC)J -/-	0.22603	0.31066	0.44659	0.757	0.474
Zfp422^em1(IMPC)J -/-	-0.13654	0.41414	-0.13002	0.913	0.744
Zfp706^em1(IMPC)J/Mmjax -/+	0.58140	0.76443	1.0145	0.757	0.455
Zfp827^em1(IMPC)J/Mmjax -/+	-0.10630	0.71292	-0.064872	0.961	0.885
Zfp827^em1(IMPC)J/Mmjax -/-	-0.95621	0.59143	-1.0897	0.532	0.145

TRAIT CORRELATION PLOT

Correlate tissue area with JaxKOMP-LAP trait: