JaxKOMP-EAP effect sizes:   Tsen54em1(IMPC)J/Mmjax -/+                         Gene Tsen54

  MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
      In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls, for all measured numeric phenotypes in   JaxKOMP-EAP
Dimensions  ×  px
Plot Options    
Significance Threshold    1e-81e-71e-61e-51e-41e-30.010.11      
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   ABR testclinical blood chemistryERG v2.0glucose tolerance testgrip strengthheart weighthematologyholeboardlight / darkSHIRPAstartle / PPIstartle /PPISHIRPAlight /darkholeboardhematologyheart weightgripstrengthglucose tolerance testERG v2.0clinicalbloodchemistryABR testProcedure-2.5-2.0-1.5-1.0-0.50.00.51.01.52.02.5Tsen54em1(IMPC)J/Mmjax -/+ Trait Effect RankZ
  
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Procedure
JaxKOMP-EAP Trait
Trait Effect
Trait Effect SE
Trait Effect RankZ
Adjusted p-value
Unadjusted p-value
ABR testauditory brainstem response (ABR) threshold, sound pressure level, 6 kHz pip16.15218.6672.20310.8120.451
ABR testauditory brainstem response (ABR) threshold, sound pressure level, 12 kHz pip21.51124.5362.22620.8260.445
ABR testauditory brainstem response (ABR) threshold, sound pressure level, 18 kHz pip9.611111.1321.39820.7690.451
ABR testauditory brainstem response (ABR) threshold, sound pressure level, 24 kHz pip9.79887.01641.37000.6460.257
ABR testauditory brainstem response (ABR) threshold, sound pressure level, 30 kHz pip4.50004.69750.678010.7350.409
clinical blood chemistryalanine transaminase (plasma ALT)-5.83987.4665-0.546810.8510.577
clinical blood chemistryalbumin (plasma Alb)0.972210.424231.43490.5820.262
clinical blood chemistryalkaline phosphatase (plasma ALP)-8.207713.691-1.82610.8230.656
clinical blood chemistryaspartate transaminase (plasma AST)-19.26539.799-0.879820.9050.713
clinical blood chemistryaspartate transaminase to alanine transaminase ratio (plasma AST:ALT)-0.00165700.444960.0283910.9980.998


  MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)
      In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in   JaxKOMP-EAP
Dimensions  ×  px
Plot Options
Include Sexes Data
Significance Threshold    1e-81e-71e-61e-51e-41e-30.010.11  
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   eye morphologySHIRPASHIRPAeyemorphologyProcedure-20246810121416182022Tsen54em1(IMPC)J/Mmjax -/+ Trait Effect %
  
Select table page: 1 - 10 / 384 (384)
Procedure
JaxKOMP-EAP Trait
Sex
Trait Effect
P-value
eye morphologyanterior chamber depthfemales1.0 %1.0
eye morphologyanterior chamber depthmales0.0 %1.0
eye morphologyanterior chamber depthboth1.0 %1.0
eye morphologybulging eyefemales1.0 %1.0
eye morphologybulging eyemales0.0 %1.0
eye morphologybulging eyeboth1.0 %1.00
eye morphologycorneafemales21.0 %0.0324
eye morphologycorneamales12.0 %0.119
eye morphologycorneaboth16.0 %0.00744
eye morphologycornea opacityfemales5.0 %1.00


  GENOTYPE CORRELATION PLOT
Correlate Tsen54em1(IMPC)J/Mmjax -/+ with genotype:















  This genotype correlation visualization can include both EAP and LAP measures.