MPD: JaxKOMP-EAP genotype: Ints7<sup>em1(IMPC)J</sup>/Mmjax -/+

JaxKOMP-EAP effect sizes: Ints7^em1(IMPC)J/Mmjax -/+ Gene Ints7

MULTIPLE (NUMERIC) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect size vs. C57BL/6NJ controls, for all measured numeric phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure Standard Error Show Effect Sizes RankZ

Significance Threshold p-Value Threshold Adjusted Unadjusted

Download Plot

Procedure	JaxKOMP-EAP Trait	Trait Effect	Trait Effect SE	Trait Effect RankZ	Adjusted p-value	Unadjusted p-value

ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 6 kHz pip	4.3618	1.8038	0.97203	0.297	0.0324
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 12 kHz pip	-1.8501	4.4299	-0.38708	0.906	0.684
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 18 kHz pip	6.6907	4.5217	1.0190	0.528	0.167
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 24 kHz pip	8.9755	6.4474	1.2567	0.578	0.189
ABR test	auditory brainstem response (ABR) threshold, sound pressure level, 30 kHz pip	3.8553	6.1051	0.59391	0.812	0.541
body composition	body length	0.13018	0.072605	1.7019	0.307	0.0889
body composition	body weight (at time of DXA)	-1.4356	0.81648	-0.91259	0.254	0.0940
body composition	bone area, whole body scan, head excluded	0.16902	0.18745	0.92052	0.635	0.378
body composition	bone mineral content of whole body scan, head excluded	0.011189	0.015107	0.79244	0.719	0.467
body composition	bone mineral content to body weight ratio	0.00064610	0.00059486	1.0327	0.568	0.291
body composition	bone mineral density of whole body scan, head excluded	0.00034115	0.00076990	0.38716	0.839	0.662
body composition	fat tissue mass of whole body scan, head excluded	-0.46003	0.64354	-0.86361	0.711	0.483
body composition	fat tissue mass to body weight ratio	-0.018315	0.017736	-0.82271	0.557	0.315
body composition	lean tissue mass of whole body scan, head excluded	0.31857	0.49286	0.51160	0.780	0.526
body composition	lean tissue mass to body weight ratio	0.019237	0.016978	0.95191	0.529	0.271
body composition	percent fat, whole body scan, head excluded	-1.8634	1.7333	-0.88968	0.544	0.296
body composition	ratio of soft-tissue attenuation coefficients	0.0020695	0.0019262	0.89427	0.548	0.296
body composition	tissue area	0.056983	0.37770	0.38959	0.963	0.882
body composition	total tissue mass, whole body scan, head excluded	0.18381	0.64573	0.20206	0.888	0.779
clinical blood chemistry	alanine transaminase (plasma ALT)	8.3752	4.5012	0.63976	0.421	0.0762
clinical blood chemistry	albumin (plasma Alb)	-1.1453	0.55684	-1.4152	0.284	0.0518
clinical blood chemistry	alkaline phosphatase (plasma ALP)	1.5101	3.1714	-0.27183	0.812	0.639
clinical blood chemistry	aspartate transaminase (plasma AST)	29.610	11.654	1.0690	0.177	0.0186
clinical blood chemistry	aspartate transaminase to alanine transaminase ratio (plasma AST:ALT)	0.29692	0.16723	0.90011	0.458	0.0897
clinical blood chemistry	blood urea nitrogen (BUN)	-4.7322	1.3866	-1.6529	0.0388	0.00262
clinical blood chemistry	calcium (plasma Ca)	0.023311	0.073216	0.50153	0.869	0.753
clinical blood chemistry	creatinine (plasma)	-0.0079681	0.026325	-0.074635	0.872	0.765
clinical blood chemistry	glucose (plasma GLU, no fast)	16.989	10.779	0.94822	0.305	0.130
clinical blood chemistry	HDL cholesterol (plasma HDL)	0.75555	2.7313	-0.14719	0.920	0.785
clinical blood chemistry	HDL cholesterol to total cholesterol ratio	0.0077928	0.0078840	0.29830	0.658	0.334
clinical blood chemistry	phosphorus (plasma phosphate)	0.64848	0.64583	0.91671	0.616	0.326
clinical blood chemistry	total bilirubin (plasma TBIL)	0.0036628	0.0041310	0.26127	0.724	0.385
clinical blood chemistry	total cholesterol (plasma CHOL, no fast)	0.11475	3.5801	-0.22292	0.995	0.975
clinical blood chemistry	total protein (plasma TP)	-0.81039	0.81884	-0.70345	0.604	0.334
clinical blood chemistry	triglyceride (plasma TG, no fast)	-9.6503	7.0974	-0.31563	0.472	0.188
EKG	duration of PQ interval	0.98898	0.82435	1.2216	0.786	0.237
EKG	duration of PR interval	0.72189	0.83468	0.84680	0.877	0.392
EKG	duration of QRS interval	-0.58155	0.24211	-1.7673	0.695	0.0212
EKG	duration of QT interval	-0.92581	0.67494	-0.70775	0.677	0.178
EKG	duration of QTC interval, calculated by dividing QT interval by square root of preceding RR interval	-0.86996	0.74924	-0.84680	0.805	0.253
EKG	duration of RR interval	-0.66866	1.1596	-0.066543	0.840	0.567
EKG	duration of ST interval	-0.34047	0.61065	-0.13542	0.894	0.580
EKG	heart rate coefficient of variation (signal intensity)	-0.17982	0.92166	-0.042327	0.971	0.846
EKG	heart rate variability, mean of differences between sequential beats; beats per min	-0.87880	6.6547	0.0040300	0.975	0.896
EKG	heart rate, beats per min	5.4378	9.8612	0.055485	0.833	0.584
EKG	mean R amplitude, mean amplitude of signal measured from isoelectric line to peak of QRS	-0.037650	0.055994	-0.42483	0.800	0.505
EKG	mean SR amplitude, mean amplitude of signal measured from signal minimum line to peak of QRS	-0.064286	0.092928	-0.46716	0.777	0.493
EKG	number of signals	5.7106	7.1410	1.0385	0.854	0.429
EKG	proportion of number pairs of successive beat-to-beat intervals that exceed 50 ms	-0.32876	3.2763	0.018312	0.990	0.921
EKG	QT dispersion, measured as inter-lead variability of QT intervals	1.6814	2.5715	0.52718	0.955	0.517
EKG	QTc dispersion, calculated as rate-corrected QT dispersion	2.1252	3.0736	0.53414	0.931	0.493
EKG	root mean square of successive differences of neighboring RR intervals	0.28756	1.3328	0.26710	0.962	0.830
glucose tolerance test	amount glucose injected	2.5520	4.2444	1.0638	0.841	0.555
glucose tolerance test	plasma glucose, 0min	-4.5460	6.5939	-0.67708	0.707	0.498
glucose tolerance test	plasma glucose, 15min	-54.865	35.149	-1.3694	0.428	0.134
glucose tolerance test	plasma glucose, 30min	-22.611	29.449	-0.58005	0.738	0.452
glucose tolerance test	plasma glucose, 60min	-7.4117	29.065	-0.19898	0.923	0.801
glucose tolerance test	plasma glucose, 120min	20.299	16.818	1.1947	0.554	0.242
grip strength	body weight (at time of grip strength test)	-1.2303	0.50622	-0.86163	0.0803	0.0213
grip strength	forelimb and hindlimb grip strength (mean of trials), average	19.579	7.1455	1.6244	0.0557	0.0102
grip strength	forelimb and hindlimb grip strength (mean of trials), average normalized to bw	0.82663	0.38956	1.3862	0.152	0.0425
grip strength	forelimb and hindlimb grip strength by trial, trial1	24.321	8.8464	1.6995	0.0847	0.0100
grip strength	forelimb and hindlimb grip strength by trial, trial2	13.053	9.7471	1.0412	0.435	0.191
grip strength	forelimb and hindlimb grip strength by trial, trial3	15.107	8.7556	1.1870	0.309	0.0951
grip strength	forelimb grip strength (mean of trials), average	14.113	4.4382	1.9922	0.0377	0.00349
grip strength	forelimb grip strength (mean of trials), average normalized to bw	0.65920	0.22160	1.7715	0.0594	0.00586
grip strength	forelimb grip strength by trial, trial1	10.225	5.3053	1.3900	0.311	0.0638
grip strength	forelimb grip strength by trial, trial2	10.990	4.4025	1.4015	0.149	0.0183
grip strength	forelimb grip strength by trial, trial3	19.877	5.4897	2.1839	0.0336	0.00107
heart weight	heart weight, normalized to body weight	0.049959	0.12150	-0.26593	0.825	0.684
heart weight	heart weight, weight	-2.6297	2.9993	-0.73468	0.598	0.389
hematology	basophil differential (percent of total WBC)	0.0071417	0.032957	0.14325	0.958	0.830
hematology	calculated hemoglobin (cHGB)	0.59423	0.18058	1.5181	0.0546	0.00349
hematology	eosinophil differential (percent of total WBC)	-0.079028	0.20913	-0.15722	0.906	0.709
hematology	hematocrit (HCT)	0.93634	0.47392	0.70308	0.293	0.0615
hematology	hemoglobin concentration distribution width (HDW)	0.029500	0.020549	0.80119	0.462	0.165
hematology	large unstained cells (percent of total WBC)	-0.047297	0.073837	-0.30974	0.805	0.528
hematology	lymphocyte differential (percent of total WBC)	1.4459	1.0817	0.50909	0.448	0.195
hematology	mean corpuscular hemoglobin (CHr)	0.11930	0.075617	0.93090	0.330	0.130
hematology	mean platelet volume (MPV)	-0.19199	0.065086	-1.1756	0.0445	0.00741
hematology	mean RBC corpuscular hemoglobin (MCH)	0.011284	0.092244	0.013065	0.965	0.904
hematology	mean RBC corpuscular hemoglobin concentration (MCHC)	0.20626	0.14948	0.47781	0.538	0.181
hematology	mean RBC corpuscular volume (MCV)	-0.68986	0.33484	-1.1431	0.174	0.0514
hematology	measured hemoglobin (mHGB)	0.49671	0.16380	1.0576	0.0921	0.00633
hematology	monocyte differential (percent of total WBC)	-0.48953	0.17822	-1.0896	0.175	0.0118
hematology	neutrophil differential (percent of total WBC)	-0.85709	0.86611	-0.40142	0.570	0.333
hematology	platelet count (PLT; units per volume x 10³)	7.5895	48.008	0.14953	0.961	0.876
hematology	RBC corpuscular distribution width (RDW)	0.16441	0.15596	0.54766	0.565	0.304
hematology	RBC corpuscular hemoglobin concentration mean (CHCM)	0.58120	0.18113	1.3180	0.0399	0.00405
hematology	red blood cell count (RBC; per volume x 10⁶)	0.29194	0.13141	0.92952	0.203	0.0369
hematology	reticulocyte count (Retic; units per volume x 10⁹)	22.960	17.314	1.0126	0.600	0.198
hematology	reticulocyte differential (percent of total RBC)	0.11973	0.15389	0.71208	0.758	0.445
hematology	white blood cell count (WBC; units per volume x 10³)	-2.1860	0.83336	-1.2766	0.0750	0.0155
holeboard	number of hole pokes by individual hole number, 20 min test, 1	-0.88981	0.68703	-0.82965	0.685	0.203
holeboard	number of hole pokes by individual hole number, 20 min test, 2	-0.013452	0.47072	0.11758	0.990	0.977
holeboard	number of hole pokes by individual hole number, 20 min test, 3	-0.87919	0.48494	-1.3819	0.602	0.0775
holeboard	number of hole pokes by individual hole number, 20 min test, 4	-1.5046	0.70150	-1.4133	0.416	0.0381
holeboard	number of hole pokes by individual hole number, 20 min test, 5	-0.43546	0.42602	-0.62088	0.778	0.313
holeboard	number of hole pokes by individual hole number, 20 min test, 6	-0.28809	0.28621	-0.78342	0.857	0.320
holeboard	number of hole pokes by individual hole number, 20 min test, 7	0.078553	0.26505	0.21028	0.980	0.768
holeboard	number of hole pokes by individual hole number, 20 min test, 8	-0.45658	0.46117	-0.66656	0.800	0.328
holeboard	number of hole pokes by individual hole number, 20 min test, 9	0.037641	0.34432	0.17486	0.990	0.913
holeboard	number of hole pokes by individual hole number, 20 min test, 10	-0.63729	0.31328	-1.7451	0.647	0.0488
holeboard	number of hole pokes by individual hole number, 20 min test, 11	-0.19585	0.35280	-0.51705	0.910	0.582
holeboard	number of hole pokes by individual hole number, 20 min test, 12	-0.20438	0.46659	-0.26626	0.933	0.664
holeboard	number of hole pokes by individual hole number, 20 min test, 13	-0.57052	0.83196	-0.46492	0.819	0.497
holeboard	number of hole pokes by individual hole number, 20 min test, 14	-1.0906	0.44279	-1.6945	0.321	0.0182
holeboard	number of hole pokes by individual hole number, 20 min test, 15	-0.99535	0.68764	-1.5014	0.634	0.156
holeboard	number of hole pokes by individual hole number, 20 min test, 16	0.20665	0.97306	0.20727	0.954	0.833
holeboard	total number of hole pokes, 20 min test	-8.2392	3.7393	-1.1050	0.206	0.0334
light / dark	fecal boli count, 20 min test	0.12328	0.50649	0.14039	0.932	0.809
light / dark	latency to enter dark zone, 20 min test	18.074	33.116	0.25279	0.868	0.588
light / dark	number of transitions between light and dark zones, 20 min test	0.71755	8.1917	0.18630	0.971	0.931
light / dark	percentage of total time in dark zone, 20 min test	2.9341	3.4591	0.65342	0.716	0.401
light / dark	percentage of total time in light zone, 20 min test	-2.9341	3.4591	-0.65510	0.715	0.401
light / dark	time mobile in dark zone, 20 min test	5.4990	10.261	0.27519	0.822	0.595
light / dark	time mobile in light zone, 20 min test	-3.2565	11.396	-0.47416	0.895	0.777
light / dark	time spent in dark zone, 20 min test	20.652	47.029	0.51234	0.898	0.663
light / dark	time spent in light zone, 20 min test	-20.652	47.029	-0.51234	0.898	0.663
open field	average speed in center of arena, 20 min test	0.48427	0.38655	0.75734	0.560	0.218
open field	average speed in periphery of arena, 20 min test	0.29538	0.16641	0.61458	0.230	0.0835
open field	distance traveled habituation ratio, 20 min test	-4.2152	7.9273	-0.32023	0.822	0.598
open field	distance traveled in center of arena, 20 min test	30.826	90.567	-0.20483	0.861	0.735
open field	distance traveled in periphery of arena, 20 min test	387.37	172.56	1.0274	0.138	0.0304
open field	distance traveled slope, 20 min test	-2.7278	7.1371	-0.18430	0.890	0.704
open field	distance traveled, 20 min test, 1st 5min	151.98	84.670	0.81963	0.253	0.0802
open field	distance traveled, 20 min test, 2nd 5min	50.724	53.694	0.069199	0.594	0.350
open field	distance traveled, 20 min test, 3rd 5min	91.129	54.826	0.56820	0.295	0.104
open field	distance traveled, 20 min test, 4th 5min	114.04	54.506	0.75020	0.179	0.0428
open field	number of clockwise revolution episodes, 20 min test	1.5050	1.5314	0.47388	0.690	0.332
open field	number of counter-clockwise revolution episodes, 20 min test	1.5356	1.2455	0.40193	0.511	0.225
open field	number of fecal boli, 20 min test	0.72308	0.97960	0.76593	0.747	0.467
open field	number of rears in 5 min bins, 20 min test, 1st 5min	5.1739	2.4785	1.1801	0.201	0.0433
open field	number of rears in 5 min bins, 20 min test, 2nd 5min	1.9568	2.9984	0.14891	0.749	0.518
open field	number of rears in 5 min bins, 20 min test, 3rd 5min	0.73478	2.6299	-0.15026	0.893	0.781
open field	number of rears in 5 min bins, 20 min test, 4th 5min	-0.22542	2.8602	-0.40339	0.970	0.938
open field	percentage of total time in center of arena, 20 min test	-5.1144	4.2363	-1.4396	0.554	0.234
open field	percentage of total time in center of arena, slope, 20 min test	3.0185	1.8855	1.7364	0.574	0.117
open field	percentage of total time in center, habituation ratio, 20 min test	3.2967	1.9182	1.8731	0.537	0.0934
open field	percentage of total time in corners of arena, 20 min test	2.0949	4.0070	0.68421	0.833	0.604
open field	percentage of total time in corners, habituation ratio, 20 min test	-3.7174	2.0128	-1.8969	0.515	0.0724
open field	percentage of total time in corners, slope, 20 min test	-3.5263	1.9711	-1.8578	0.520	0.0814
open field	permanence time in center of arena, 20 min test	-61.366	50.835	-1.4396	0.554	0.234
open field	permanence time in corners of arena, 20 min test	25.161	48.083	0.68591	0.834	0.604
open field	permanence time in periphery of arena, 20 min test	61.418	50.843	1.4396	0.553	0.234
open field	total distance traveled, 20 min test	403.07	217.75	0.64404	0.210	0.0716
open field	total number of rears, 20 min test	8.0035	9.8230	0.21169	0.665	0.420
open field	whole arena average speed, 20 min test	0.33708	0.18152	0.64569	0.209	0.0707
open field	whole arena resting time, 20 min test	-51.244	19.055	-0.83285	0.0549	0.0104
open field	whole arena time spent mobile, 20 min test	51.314	19.057	1.0528	0.0562	0.0103
open field	whole arena time spent vertical, 20 min test	10.732	9.2212	0.72727	0.551	0.252
SHIRPA	locomotor activity (number of squares in the arena the mouse moves into with all four paws in first 30 s of test)	1.3603	0.92260	0.74901	0.461	0.151
startle / PPI	average baseline movement during background noise	0.23256	1.6150	0.24843	0.991	0.886
startle / PPI	average of each corrected maximum percent pre-pulse inhibition value	0.27300	0.14279	1.9206	0.352	0.0655
startle / PPI	average of each corrected percent pre-pulse inhibition value	0.23431	0.19652	2.1119	0.589	0.243
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-0.62454	9.2003	-0.010509	0.995	0.946
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	15.678	9.7226	1.6002	0.468	0.117
startle / PPI	average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	20.698	7.1223	2.0073	0.0859	0.00682
startle / PPI	average startle response to full pulse (120 dB)	-14.773	42.722	-0.12008	0.888	0.732
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-16.958	45.484	-0.17249	0.859	0.712
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-33.850	34.970	-0.50951	0.557	0.341
startle / PPI	average startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-35.952	29.828	-0.65570	0.456	0.238
startle / PPI	average startle response to pre-pulse, 74dB sound pressure level	3.2204	1.6365	1.6365	0.532	0.0584
startle / PPI	average startle response to pre-pulse, 78dB sound pressure level	-0.30177	1.3987	-0.20244	0.972	0.831
startle / PPI	average startle response to pre-pulse, 82dB sound pressure level	0.90431	1.8985	0.27017	0.902	0.637
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.058349	0.17106	0.58770	0.949	0.735
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.31313	0.26273	2.1821	0.586	0.243
startle / PPI	corrected average percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.31204	0.18638	2.0071	0.314	0.104
startle / PPI	corrected average startle response to full pulse (120 dB) minus average baseline movement during background noise	-15.009	42.992	-0.12573	0.879	0.729
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 74dB sound pressure level	-20.140	45.763	-0.21389	0.830	0.663
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 78dB sound pressure level	-33.419	35.017	-0.49045	0.561	0.348
startle / PPI	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse, 82dB sound pressure level	-36.856	29.551	-0.65223	0.437	0.222
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	0.063892	0.13151	0.59270	0.934	0.631
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	0.32729	0.19331	2.0745	0.403	0.101
startle / PPI	corrected maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	0.38451	0.15350	2.0867	0.120	0.0179
startle / PPI	corrected maximum startle response to full pulse (120 dB) minus maximum baseline movement during background noise	-27.850	150.04	0.021719	0.942	0.854
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 74dB sound pressure level	-60.945	163.36	-0.16823	0.854	0.712
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 78dB sound pressure level	-113.85	128.52	-0.43124	0.600	0.383
startle / PPI	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse, 82dB sound pressure level	-139.16	107.64	-0.68198	0.413	0.206
startle / PPI	maximum baseline movement during background noise	-0.69681	3.5407	-0.11162	0.969	0.845
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	3.6694	9.4005	0.39462	0.953	0.699
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	22.455	10.401	2.0179	0.305	0.0390
startle / PPI	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	27.414	7.5796	2.4725	0.0328	0.00108
startle / PPI	maximum startle response to full pulse (120 dB)	-28.547	149.47	0.013311	0.937	0.850
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 74dB sound pressure level	-50.037	163.09	-0.11021	0.888	0.761
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 78dB sound pressure level	-117.08	128.50	-0.45598	0.592	0.370
startle / PPI	maximum startle response to full pulse (120 dB) preceded by pre-pulse, 82dB sound pressure level	-136.19	108.10	-0.68375	0.430	0.217
startle / PPI	maximum startle response to pre-pulse, 74dB sound pressure level	10.907	5.3413	2.1392	0.494	0.0500
startle / PPI	maximum startle response to pre-pulse, 78dB sound pressure level	-2.9409	3.5429	-0.81751	0.816	0.413
startle / PPI	maximum startle response to pre-pulse, 82dB sound pressure level	2.9714	4.0312	0.37050	0.804	0.467

MULTIPLE (CATEGORICAL) TRAIT PROFILE PLOT — Early Adult Phenotyping study (EAP)

In this plot, data points are the computed genotype effect % vs. C57BL/6NJ controls, for all measured categorical phenotypes in JaxKOMP-EAP

Dimensions Width: × Height: px

Plot Options Group by Procedure

Include Sexes Data Both Females Males

Significance Threshold p-Value Threshold

Download Plot

Procedure	JaxKOMP-EAP Trait	Sex	Trait Effect	P-value

eye morphology	anterior chamber depth	females	1.0 %	1.0
eye morphology	anterior chamber depth	males	0.0 %	1.0
eye morphology	anterior chamber depth	both	1.0 %	1.0
eye morphology	bulging eye	females	1.0 %	1.0
eye morphology	bulging eye	males	0.0 %	1.0
eye morphology	bulging eye	both	1.0 %	1.00
eye morphology	cornea	females	11.0 %	0.257
eye morphology	cornea	males	2.0 %	1.0
eye morphology	cornea	both	6.0 %	0.326
eye morphology	cornea opacity	females	5.0 %	1.00
eye morphology	cornea opacity	males	1.0 %	1.0
eye morphology	cornea opacity	both	3.0 %	1.0
eye morphology	cornea vascularization	females	3.0 %	1.0
eye morphology	cornea vascularization	males	1.0 %	1.0
eye morphology	cornea vascularization	both	2.0 %	1.0
eye morphology	corneal deposits	females	2.0 %	1.0
eye morphology	corneal deposits	males	1.0 %	1.0
eye morphology	corneal deposits	both	1.0 %	1.00
eye morphology	corneal mineralization	females	2.0 %	1.0
eye morphology	corneal mineralization	males	1.0 %	1.0
eye morphology	corneal mineralization	both	1.0 %	1.0
eye morphology	corneal scleralization	females	3.0 %	1.00
eye morphology	corneal scleralization	males	1.0 %	1.0
eye morphology	corneal scleralization	both	2.0 %	1.0
eye morphology	corneal ulcer	females	1.0 %	1.0
eye morphology	corneal ulcer	males	1.0 %	1.0
eye morphology	corneal ulcer	both	1.0 %	1.0
eye morphology	eye closure	females	1.0 %	1.00
eye morphology	eye closure	males	0.0 %	1.0
eye morphology	eye closure	both	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	females	2.0 %	1.00
eye morphology	eye hemorrhage or blood presence	males	1.0 %	1.0
eye morphology	eye hemorrhage or blood presence	both	1.0 %	1.0
eye morphology	eyelid morphology	females	1.0 %	1.0
eye morphology	eyelid morphology	males	0.0 %	1.0
eye morphology	eyelid morphology	both	1.0 %	1.0
eye morphology	eyes (present, absent)	females	1.0 %	1.0
eye morphology	eyes (present, absent)	males	0.0 %	1.0
eye morphology	eyes (present, absent)	both	0.0 %	1.0
eye morphology	fusion between cornea and lens	females	4.0 %	1.00
eye morphology	fusion between cornea and lens	males	2.0 %	1.0
eye morphology	fusion between cornea and lens	both	3.0 %	1.0
eye morphology	iris pigmentation	females	2.0 %	1.0
eye morphology	iris pigmentation	males	1.0 %	1.0
eye morphology	iris pigmentation	both	2.0 %	1.0
eye morphology	iris transillumination	females	2.0 %	1.00
eye morphology	iris transillumination	males	1.0 %	1.00
eye morphology	iris transillumination	both	1.0 %	1.00
eye morphology	irispupil	females	4.0 %	1.00
eye morphology	irispupil	males	3.0 %	1.0
eye morphology	irispupil	both	3.0 %	1.0
eye morphology	lacrimation	females	3.0 %	1.0
eye morphology	lacrimation	males	2.0 %	1.0
eye morphology	lacrimation	both	3.0 %	1.0
eye morphology	lens	females	10.0 %	1.00
eye morphology	lens	males	8.0 %	1.00
eye morphology	lens	both	9.0 %	1.0
eye morphology	lens opacity	females	9.0 %	1.0
eye morphology	lens opacity	males	6.0 %	1.00
eye morphology	lens opacity	both	7.0 %	1.00
eye morphology	narrow eye opening	females	2.0 %	1.0
eye morphology	narrow eye opening	males	1.0 %	1.0
eye morphology	narrow eye opening	both	1.0 %	1.00
eye morphology	optic disc	females	4.0 %	1.00
eye morphology	optic disc	males	2.0 %	1.00
eye morphology	optic disc	both	3.0 %	1.00
eye morphology	persistence of hyaloid vascular system	females	14.0 %	1.0
eye morphology	persistence of hyaloid vascular system	males	5.0 %	1.0
eye morphology	persistence of hyaloid vascular system	both	9.0 %	1.00
eye morphology	pupil dilation	females	12.0 %	0.0361
eye morphology	pupil dilation	males	1.0 %	1.00
eye morphology	pupil dilation	both	6.0 %	0.0890
eye morphology	pupil light response	females	2.0 %	1.00
eye morphology	pupil light response	males	1.0 %	1.0
eye morphology	pupil light response	both	2.0 %	1.0
eye morphology	pupil position	females	4.0 %	1.00
eye morphology	pupil position	males	3.0 %	1.0
eye morphology	pupil position	both	4.0 %	1.0
eye morphology	pupil shape	females	3.0 %	1.00
eye morphology	pupil shape	males	2.0 %	1.0
eye morphology	pupil shape	both	3.0 %	1.0
eye morphology	retina	females	10.0 %	0.457
eye morphology	retina	males	8.0 %	0.703
eye morphology	retina	both	3.0 %	0.693
eye morphology	retinal blood vessels	females	4.0 %	1.0
eye morphology	retinal blood vessels	males	2.0 %	1.0
eye morphology	retinal blood vessels	both	3.0 %	1.0
eye morphology	retinal blood vessels pattern	females	5.0 %	1.0
eye morphology	retinal blood vessels pattern	males	2.0 %	1.00
eye morphology	retinal blood vessels pattern	both	4.0 %	1.00
eye morphology	retinal blood vessels structure	females	4.0 %	1.00
eye morphology	retinal blood vessels structure	males	2.0 %	1.0
eye morphology	retinal blood vessels structure	both	3.0 %	1.0
eye morphology	retinal pigmentation	females	12.0 %	1.0
eye morphology	retinal pigmentation	males	14.0 %	1.0
eye morphology	retinal pigmentation	both	13.0 %	1.0
eye morphology	retinal structure	females	4.0 %	1.00
eye morphology	retinal structure	males	2.0 %	1.00
eye morphology	retinal structure	both	3.0 %	1.00
eye morphology	synechia	females	4.0 %	1.0
eye morphology	synechia	males	2.0 %	1.00
eye morphology	synechia	both	3.0 %	1.00
eye morphology	vitreous	females	4.0 %	1.00
eye morphology	vitreous	males	2.0 %	1.0
eye morphology	vitreous	both	3.0 %	1.0
SHIRPA	activity body position	females	1.0 %	1.0
SHIRPA	activity body position	males	2.0 %	1.0
SHIRPA	activity body position	both	1.0 %	1.00
SHIRPA	aggression	females	0.0 %	1.00
SHIRPA	aggression	males	1.0 %	1.0
SHIRPA	aggression	both	1.0 %	1.00
SHIRPA	body length	females	0.0 %	1.0
SHIRPA	body length	males	0.0 %	1.0
SHIRPA	body length	both	0.0 %	1.0
SHIRPA	body position	females	0.0 %	1.0
SHIRPA	body position	males	1.0 %	1.0
SHIRPA	body position	both	0.0 %	1.00
SHIRPA	body thickness	females	1.0 %	1.0
SHIRPA	body thickness	males	0.0 %	1.0
SHIRPA	body thickness	both	0.0 %	1.00
SHIRPA	coat color abdomen	females	47.0 %	0.000103
SHIRPA	coat color abdomen	males	25.0 %	0.0248
SHIRPA	coat color abdomen	both	36.0 %	0.00000836
SHIRPA	coat color back	females	0.0 %	1.0
SHIRPA	coat color back	males	0.0 %	1.0
SHIRPA	coat color back	both	0.0 %	1.00
SHIRPA	coat color head	females	0.0 %	1.0
SHIRPA	coat color head	males	0.0 %	1.0
SHIRPA	coat color head	both	0.0 %	1.0
SHIRPA	coat color pattern abdomen	females	1.0 %	1.0
SHIRPA	coat color pattern abdomen	males	1.0 %	1.0
SHIRPA	coat color pattern abdomen	both	1.0 %	1.00
SHIRPA	coat color pattern back	females	0.0 %	1.0
SHIRPA	coat color pattern back	males	0.0 %	1.0
SHIRPA	coat color pattern back	both	0.0 %	1.00
SHIRPA	coat color pattern head	females	0.0 %	1.0
SHIRPA	coat color pattern head	males	0.0 %	1.00
SHIRPA	coat color pattern head	both	0.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	females	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	males	2.0 %	1.0
SHIRPA	coat hair abdomen texture appearance	both	2.0 %	1.0
SHIRPA	coat hair back texture appearance	females	0.0 %	1.0
SHIRPA	coat hair back texture appearance	males	0.0 %	1.0
SHIRPA	coat hair back texture appearance	both	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	females	0.0 %	1.0
SHIRPA	coat hair distribution abdomen	males	1.0 %	1.0
SHIRPA	coat hair distribution abdomen	both	1.0 %	1.0
SHIRPA	coat hair distribution back	females	0.0 %	1.0
SHIRPA	coat hair distribution back	males	0.0 %	1.0
SHIRPA	coat hair distribution back	both	0.0 %	1.00
SHIRPA	coat hair distribution head	females	1.0 %	1.00
SHIRPA	coat hair distribution head	males	1.0 %	1.0
SHIRPA	coat hair distribution head	both	1.0 %	1.0
SHIRPA	coat hair head texture appearance	females	0.0 %	1.00
SHIRPA	coat hair head texture appearance	males	0.0 %	1.0
SHIRPA	coat hair head texture appearance	both	0.0 %	1.0
SHIRPA	contact righting	females	5.0 %	1.0
SHIRPA	contact righting	males	5.0 %	1.00
SHIRPA	contact righting	both	5.0 %	1.00
SHIRPA	ear morphology	females	0.0 %	1.0
SHIRPA	ear morphology	males	0.0 %	1.0
SHIRPA	ear morphology	both	0.0 %	1.0
SHIRPA	fat distribution	females	0.0 %	1.0
SHIRPA	fat distribution	males	0.0 %	1.0
SHIRPA	fat distribution	both	0.0 %	1.0
SHIRPA	forelimb digit number	females	0.0 %	1.00
SHIRPA	forelimb digit number	males	0.0 %	1.0
SHIRPA	forelimb digit number	both	0.0 %	1.0
SHIRPA	forelimb digit position	females	0.0 %	1.0
SHIRPA	forelimb digit position	males	0.0 %	1.0
SHIRPA	forelimb digit position	both	0.0 %	1.0
SHIRPA	forelimb digit shape	females	0.0 %	1.0
SHIRPA	forelimb digit shape	males	0.0 %	1.0
SHIRPA	forelimb digit shape	both	0.0 %	1.0
SHIRPA	forelimb digit size	females	0.0 %	1.0
SHIRPA	forelimb digit size	males	0.0 %	1.0
SHIRPA	forelimb digit size	both	0.0 %	1.0
SHIRPA	forelimb footpads	females	0.0 %	1.0
SHIRPA	forelimb footpads	males	0.0 %	1.0
SHIRPA	forelimb footpads	both	0.0 %	1.0
SHIRPA	forelimb nail length	females	0.0 %	1.0
SHIRPA	forelimb nail length	males	0.0 %	1.0
SHIRPA	forelimb nail length	both	0.0 %	1.0
SHIRPA	forelimb nail number	females	0.0 %	1.0
SHIRPA	forelimb nail number	males	0.0 %	1.0
SHIRPA	forelimb nail number	both	0.0 %	1.0
SHIRPA	forelimb nail position	females	0.0 %	1.0
SHIRPA	forelimb nail position	males	0.0 %	1.0
SHIRPA	forelimb nail position	both	0.0 %	1.0
SHIRPA	forelimb nail shape	females	0.0 %	1.0
SHIRPA	forelimb nail shape	males	0.0 %	1.0
SHIRPA	forelimb nail shape	both	0.0 %	1.0
SHIRPA	forelimbs position	females	0.0 %	1.0
SHIRPA	forelimbs position	males	0.0 %	1.0
SHIRPA	forelimbs position	both	0.0 %	1.0
SHIRPA	forelimbs shape	females	0.0 %	1.0
SHIRPA	forelimbs shape	males	0.0 %	1.0
SHIRPA	forelimbs shape	both	0.0 %	1.0
SHIRPA	forelimbs size	females	0.0 %	1.0
SHIRPA	forelimbs size	males	0.0 %	1.00
SHIRPA	forelimbs size	both	0.0 %	1.0
SHIRPA	forepaw position	females	0.0 %	1.0
SHIRPA	forepaw position	males	0.0 %	1.0
SHIRPA	forepaw position	both	0.0 %	1.0
SHIRPA	forepaw shape	females	0.0 %	1.0
SHIRPA	forepaw shape	males	0.0 %	1.0
SHIRPA	forepaw shape	both	0.0 %	1.0
SHIRPA	forepaw size	females	0.0 %	1.0
SHIRPA	forepaw size	males	0.0 %	1.0
SHIRPA	forepaw size	both	0.0 %	1.0
SHIRPA	gait (fluidity)	females	0.0 %	1.0
SHIRPA	gait (fluidity)	males	0.0 %	1.0
SHIRPA	gait (fluidity)	both	0.0 %	1.0
SHIRPA	genitalia morphology	females	0.0 %	1.00
SHIRPA	genitalia morphology	males	0.0 %	1.0
SHIRPA	genitalia morphology	both	0.0 %	1.00
SHIRPA	genitalia presence	females	0.0 %	1.0
SHIRPA	genitalia presence	males	0.0 %	1.0
SHIRPA	genitalia presence	both	0.0 %	1.0
SHIRPA	genitalia size	females	0.0 %	1.0
SHIRPA	genitalia size	males	0.0 %	1.00
SHIRPA	genitalia size	both	0.0 %	1.00
SHIRPA	head bobbing	females	0.0 %	1.0
SHIRPA	head bobbing	males	0.0 %	1.0
SHIRPA	head bobbing	both	0.0 %	1.0
SHIRPA	head morphology	females	0.0 %	1.0
SHIRPA	head morphology	males	0.0 %	1.0
SHIRPA	head morphology	both	0.0 %	1.0
SHIRPA	head size	females	0.0 %	1.0
SHIRPA	head size	males	0.0 %	1.00
SHIRPA	head size	both	0.0 %	1.0
SHIRPA	hindlimb digit number	females	1.0 %	1.00
SHIRPA	hindlimb digit number	males	0.0 %	1.0
SHIRPA	hindlimb digit number	both	0.0 %	1.0
SHIRPA	hindlimb digit position	females	0.0 %	1.0
SHIRPA	hindlimb digit position	males	0.0 %	1.0
SHIRPA	hindlimb digit position	both	0.0 %	1.0
SHIRPA	hindlimb digit shape	females	0.0 %	1.0
SHIRPA	hindlimb digit shape	males	0.0 %	1.0
SHIRPA	hindlimb digit shape	both	0.0 %	1.00
SHIRPA	hindlimb digit size	females	0.0 %	1.00
SHIRPA	hindlimb digit size	males	0.0 %	1.00
SHIRPA	hindlimb digit size	both	0.0 %	1.00
SHIRPA	hindlimb nail length	females	0.0 %	1.0
SHIRPA	hindlimb nail length	males	0.0 %	1.00
SHIRPA	hindlimb nail length	both	0.0 %	1.0
SHIRPA	hindlimb nail number	females	0.0 %	1.0
SHIRPA	hindlimb nail number	males	1.0 %	1.00
SHIRPA	hindlimb nail number	both	0.0 %	1.0
SHIRPA	hindlimb nail position	females	0.0 %	1.0
SHIRPA	hindlimb nail position	males	0.0 %	1.0
SHIRPA	hindlimb nail position	both	0.0 %	1.0
SHIRPA	hindlimb nail shape	females	0.0 %	1.0
SHIRPA	hindlimb nail shape	males	0.0 %	1.0
SHIRPA	hindlimb nail shape	both	0.0 %	1.0
SHIRPA	hindlimbs footpads	females	0.0 %	1.0
SHIRPA	hindlimbs footpads	males	0.0 %	1.0
SHIRPA	hindlimbs footpads	both	0.0 %	1.0
SHIRPA	hindlimbs position	females	0.0 %	1.0
SHIRPA	hindlimbs position	males	0.0 %	1.0
SHIRPA	hindlimbs position	both	0.0 %	1.0
SHIRPA	hindlimbs shape	females	0.0 %	1.0
SHIRPA	hindlimbs shape	males	0.0 %	1.0
SHIRPA	hindlimbs shape	both	0.0 %	1.0
SHIRPA	hindlimbs size	females	0.0 %	1.0
SHIRPA	hindlimbs size	males	0.0 %	1.0
SHIRPA	hindlimbs size	both	0.0 %	1.0
SHIRPA	hindpaw position	females	0.0 %	1.0
SHIRPA	hindpaw position	males	0.0 %	1.0
SHIRPA	hindpaw position	both	0.0 %	1.0
SHIRPA	hindpaw shape	females	0.0 %	1.0
SHIRPA	hindpaw shape	males	0.0 %	1.0
SHIRPA	hindpaw shape	both	0.0 %	1.0
SHIRPA	hindpaw size	females	0.0 %	1.0
SHIRPA	hindpaw size	males	0.0 %	1.0
SHIRPA	hindpaw size	both	0.0 %	1.0
SHIRPA	limb grasp	females	9.0 %	1.00
SHIRPA	limb grasp	males	9.0 %	0.337
SHIRPA	limb grasp	both	1.0 %	1.0
SHIRPA	lower lip morphology	females	0.0 %	1.0
SHIRPA	lower lip morphology	males	0.0 %	1.0
SHIRPA	lower lip morphology	both	0.0 %	1.0
SHIRPA	lower teeth appearance	females	0.0 %	1.0
SHIRPA	lower teeth appearance	males	0.0 %	1.0
SHIRPA	lower teeth appearance	both	0.0 %	1.0
SHIRPA	mouth morphology	females	0.0 %	1.0
SHIRPA	mouth morphology	males	0.0 %	1.0
SHIRPA	mouth morphology	both	0.0 %	1.0
SHIRPA	salivation	females	0.0 %	1.0
SHIRPA	salivation	males	0.0 %	1.0
SHIRPA	salivation	both	0.0 %	1.0
SHIRPA	skin color back paws	females	0.0 %	1.0
SHIRPA	skin color back paws	males	0.0 %	1.0
SHIRPA	skin color back paws	both	0.0 %	1.0
SHIRPA	skin color ear	females	0.0 %	1.0
SHIRPA	skin color ear	males	0.0 %	1.0
SHIRPA	skin color ear	both	0.0 %	1.0
SHIRPA	skin color front paws	females	0.0 %	1.0
SHIRPA	skin color front paws	males	0.0 %	1.0
SHIRPA	skin color front paws	both	0.0 %	1.0
SHIRPA	skin color snout	females	0.0 %	1.0
SHIRPA	skin color snout	males	0.0 %	1.0
SHIRPA	skin color snout	both	0.0 %	1.0
SHIRPA	skin color tail	females	0.0 %	1.0
SHIRPA	skin color tail	males	0.0 %	1.0
SHIRPA	skin color tail	both	0.0 %	1.0
SHIRPA	skin color whole body	females	0.0 %	1.0
SHIRPA	skin color whole body	males	0.0 %	1.0
SHIRPA	skin color whole body	both	0.0 %	1.0
SHIRPA	skin texture back paw	females	0.0 %	1.0
SHIRPA	skin texture back paw	males	0.0 %	1.0
SHIRPA	skin texture back paw	both	0.0 %	1.0
SHIRPA	skin texture ear	females	0.0 %	1.0
SHIRPA	skin texture ear	males	0.0 %	1.0
SHIRPA	skin texture ear	both	0.0 %	1.0
SHIRPA	skin texture front paws	females	0.0 %	1.0
SHIRPA	skin texture front paws	males	0.0 %	1.0
SHIRPA	skin texture front paws	both	0.0 %	1.0
SHIRPA	skin texture snout	females	0.0 %	1.0
SHIRPA	skin texture snout	males	0.0 %	1.0
SHIRPA	skin texture snout	both	0.0 %	1.0
SHIRPA	skin texture tail	females	0.0 %	1.0
SHIRPA	skin texture tail	males	0.0 %	1.0
SHIRPA	skin texture tail	both	0.0 %	1.0
SHIRPA	skin texture whole body	females	0.0 %	1.0
SHIRPA	skin texture whole body	males	0.0 %	1.0
SHIRPA	skin texture whole body	both	0.0 %	1.00
SHIRPA	snout size	females	0.0 %	1.0
SHIRPA	snout size	males	1.0 %	1.0
SHIRPA	snout size	both	0.0 %	1.0
SHIRPA	startle response	females	0.0 %	1.00
SHIRPA	startle response	males	0.0 %	1.00
SHIRPA	startle response	both	0.0 %	1.0
SHIRPA	tail curvature	females	0.0 %	1.00
SHIRPA	tail curvature	males	0.0 %	1.0
SHIRPA	tail curvature	both	0.0 %	1.00
SHIRPA	tail elevation	females	1.0 %	1.00
SHIRPA	tail elevation	males	2.0 %	1.0
SHIRPA	tail elevation	both	1.0 %	1.0
SHIRPA	tail length	females	0.0 %	1.0
SHIRPA	tail length	males	0.0 %	1.00
SHIRPA	tail length	both	0.0 %	1.0
SHIRPA	tail morphology	females	0.0 %	1.00
SHIRPA	tail morphology	males	0.0 %	1.00
SHIRPA	tail morphology	both	0.0 %	1.00
SHIRPA	tail presence	females	0.0 %	1.0
SHIRPA	tail presence	males	0.0 %	1.0
SHIRPA	tail presence	both	0.0 %	1.0
SHIRPA	tail shape	females	0.0 %	1.0
SHIRPA	tail shape	males	0.0 %	1.0
SHIRPA	tail shape	both	0.0 %	1.0
SHIRPA	tail thickness	females	0.0 %	1.0
SHIRPA	tail thickness	males	0.0 %	1.0
SHIRPA	tail thickness	both	0.0 %	1.0
SHIRPA	teeth presence	females	0.0 %	1.0
SHIRPA	teeth presence	males	0.0 %	1.0
SHIRPA	teeth presence	both	0.0 %	1.0
SHIRPA	transfer arousal	females	1.0 %	1.0
SHIRPA	transfer arousal	males	2.0 %	1.0
SHIRPA	transfer arousal	both	1.0 %	1.0
SHIRPA	tremor	females	0.0 %	1.0
SHIRPA	tremor	males	0.0 %	1.0
SHIRPA	tremor	both	0.0 %	1.00
SHIRPA	trunk curl	females	0.0 %	1.00
SHIRPA	trunk curl	males	0.0 %	1.0
SHIRPA	trunk curl	both	0.0 %	1.00
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	females	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	males	0.0 %	1.0
SHIRPA	unexpected behaviors (circling, head bobbing, jumping, retropulsion)	both	0.0 %	1.0
SHIRPA	upper lip morphology	females	0.0 %	1.0
SHIRPA	upper lip morphology	males	0.0 %	1.0
SHIRPA	upper lip morphology	both	0.0 %	1.0
SHIRPA	upper teeth appearance	females	0.0 %	1.0
SHIRPA	upper teeth appearance	males	0.0 %	1.00
SHIRPA	upper teeth appearance	both	0.0 %	1.0
SHIRPA	vibrissae appearance	females	2.0 %	1.0
SHIRPA	vibrissae appearance	males	1.0 %	1.0
SHIRPA	vibrissae appearance	both	1.0 %	1.0
SHIRPA	vibrissae presence	females	2.0 %	1.00
SHIRPA	vibrissae presence	males	1.0 %	1.0
SHIRPA	vibrissae presence	both	2.0 %	1.0
SHIRPA	vocalization	females	98.0 %	1.61e-7
SHIRPA	vocalization	males	98.0 %	3.53e-9
SHIRPA	vocalization	both	98.0 %	5.40e-16

GENOTYPE CORRELATION PLOT

Correlate Ints7^em1(IMPC)J/Mmjax -/+ with genotype: